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Automate WMDA MV4 "homework" #1294
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testing
Tasks related to testing of Atlas, no dev required
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--- docs: #1294: Added homework instructions and updated debug client models changelog. chore: #1294: Updated SQL queries. refactor: #1294: Yield Genotype matcher response as enumerable prevent memory exceptions. refactor: #1294: Use IEnumerable when bulk inserting to reduce memory usage. chore: #1294: Add SQL to select out chore: #1294: Store matching genotypes refactor: #1294: Move match prediction debug models to debug client models namespace. chore: #1294: Add HLA version to homework set. chore: #1294: SQL for selecting out homework subjects with missing HLA. chore: #1294: Process all sets imported found in a directory. chore: #1294: Import pdps directly from file. chore: #1294: Detect subjects with missing HLA. chore: #1294: Add functions to submit MV4 homework request. chore: #1294: Add genotype count to debug model, genotype matcher response.
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--- docs: #1294: Added homework instructions and updated debug client models changelog. chore: #1294: Updated SQL queries. refactor: #1294: Yield Genotype matcher response as enumerable prevent memory exceptions. refactor: #1294: Use IEnumerable when bulk inserting to reduce memory usage. chore: #1294: Add SQL to select out chore: #1294: Store matching genotypes refactor: #1294: Move match prediction debug models to debug client models namespace. chore: #1294: Add HLA version to homework set. chore: #1294: SQL for selecting out homework subjects with missing HLA. chore: #1294: Process all sets imported found in a directory. chore: #1294: Import pdps directly from file. chore: #1294: Detect subjects with missing HLA. chore: #1294: Add functions to submit MV4 homework request. chore: #1294: Add genotype count to debug model, genotype matcher response.
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--- docs: #1294: Added homework instructions and updated debug client models changelog. chore: #1294: Updated SQL queries. refactor: #1294: Yield Genotype matcher response as enumerable prevent memory exceptions. refactor: #1294: Use IEnumerable when bulk inserting to reduce memory usage. chore: #1294: Add SQL to select out chore: #1294: Store matching genotypes refactor: #1294: Move match prediction debug models to debug client models namespace. chore: #1294: Add HLA version to homework set. chore: #1294: SQL for selecting out homework subjects with missing HLA. chore: #1294: Process all sets imported found in a directory. chore: #1294: Import pdps directly from file. chore: #1294: Detect subjects with missing HLA. chore: #1294: Add functions to submit MV4 homework request. chore: #1294: Add genotype count to debug model, genotype matcher response.
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--- docs: #1294: Added homework instructions and updated debug client models changelog. chore: #1294: Updated SQL queries. refactor: #1294: Yield Genotype matcher response as enumerable prevent memory exceptions. refactor: #1294: Use IEnumerable when bulk inserting to reduce memory usage. chore: #1294: Add SQL to select out chore: #1294: Store matching genotypes refactor: #1294: Move match prediction debug models to debug client models namespace. chore: #1294: Add HLA version to homework set. chore: #1294: SQL for selecting out homework subjects with missing HLA. chore: #1294: Process all sets imported found in a directory. chore: #1294: Import pdps directly from file. chore: #1294: Detect subjects with missing HLA. chore: #1294: Add functions to submit MV4 homework request. chore: #1294: Add genotype count to debug model, genotype matcher response.
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--- docs: #1294: Added homework instructions and updated debug client models changelog. chore: #1294: Updated SQL queries. refactor: #1294: Yield Genotype matcher response as enumerable prevent memory exceptions. refactor: #1294: Use IEnumerable when bulk inserting to reduce memory usage. chore: #1294: Add SQL to select out chore: #1294: Store matching genotypes refactor: #1294: Move match prediction debug models to debug client models namespace. chore: #1294: Add HLA version to homework set. chore: #1294: SQL for selecting out homework subjects with missing HLA. chore: #1294: Process all sets imported found in a directory. chore: #1294: Import pdps directly from file. chore: #1294: Detect subjects with missing HLA. chore: #1294: Add functions to submit MV4 homework request. chore: #1294: Add genotype count to debug model, genotype matcher response.
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--- docs: #1294: Added homework instructions and updated debug client models changelog. chore: #1294: Updated SQL queries. refactor: #1294: Yield Genotype matcher response as enumerable prevent memory exceptions. refactor: #1294: Use IEnumerable when bulk inserting to reduce memory usage. chore: #1294: Add SQL to select out chore: #1294: Store matching genotypes refactor: #1294: Move match prediction debug models to debug client models namespace. chore: #1294: Add HLA version to homework set. chore: #1294: SQL for selecting out homework subjects with missing HLA. chore: #1294: Process all sets imported found in a directory. chore: #1294: Import pdps directly from file. chore: #1294: Detect subjects with missing HLA. chore: #1294: Add functions to submit MV4 homework request. chore: #1294: Add genotype count to debug model, genotype matcher response.
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--- docs: #1294: Added homework instructions and updated debug client models changelog. chore: #1294: Updated SQL queries. refactor: #1294: Yield Genotype matcher response as enumerable prevent memory exceptions. refactor: #1294: Use IEnumerable when bulk inserting to reduce memory usage. chore: #1294: Add SQL to select out chore: #1294: Store matching genotypes refactor: #1294: Move match prediction debug models to debug client models namespace. chore: #1294: Add HLA version to homework set. chore: #1294: SQL for selecting out homework subjects with missing HLA. chore: #1294: Process all sets imported found in a directory. chore: #1294: Import pdps directly from file. chore: #1294: Detect subjects with missing HLA. chore: #1294: Add functions to submit MV4 homework request. chore: #1294: Add genotype count to debug model, genotype matcher response.
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--- docs: #1294: Added homework instructions and updated debug client models changelog. chore: #1294: Updated SQL queries. refactor: #1294: Yield Genotype matcher response as enumerable prevent memory exceptions. refactor: #1294: Use IEnumerable when bulk inserting to reduce memory usage. chore: #1294: Add SQL to select out chore: #1294: Store matching genotypes refactor: #1294: Move match prediction debug models to debug client models namespace. chore: #1294: Add HLA version to homework set. chore: #1294: SQL for selecting out homework subjects with missing HLA. chore: #1294: Process all sets imported found in a directory. chore: #1294: Import pdps directly from file. chore: #1294: Detect subjects with missing HLA. chore: #1294: Add functions to submit MV4 homework request. chore: #1294: Add genotype count to debug model, genotype matcher response.
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--- docs: #1294: Added homework instructions and updated debug client models changelog. chore: #1294: Updated SQL queries. refactor: #1294: Yield Genotype matcher response as enumerable prevent memory exceptions. refactor: #1294: Use IEnumerable when bulk inserting to reduce memory usage. chore: #1294: Add SQL to select out chore: #1294: Store matching genotypes refactor: #1294: Move match prediction debug models to debug client models namespace. chore: #1294: Add HLA version to homework set. chore: #1294: SQL for selecting out homework subjects with missing HLA. chore: #1294: Process all sets imported found in a directory. chore: #1294: Import pdps directly from file. chore: #1294: Detect subjects with missing HLA. chore: #1294: Add functions to submit MV4 homework request. chore: #1294: Add genotype count to debug model, genotype matcher response.
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Homework from MV4 currently involves running specific patient-donor pairs through Atlas and returning the "working out". That means: genotype lists for patient and donor, and the matching genotypes list.
We have debug endpoints that generate this data, but need to automate entire process:
Single new locally running manual testing function that accepts:
For each PDP:
The text was updated successfully, but these errors were encountered: