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15 Open 29 Closed
15 Open 29 Closed
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Issues list

Importing distance.cmp into R
#77 opened Oct 5, 2024 by UniAlberta
7
enable taxonomy plotting with LIN taxonomic framework?
#72 opened Mar 15, 2023 by bluegenes
n_unique_kmers doesn't exist
#71 opened Mar 13, 2023 by bluegenes
2
Alpha diversity estimation
#70 opened Mar 7, 2023 by gabridinosauro
1
order sankey plot by most frequently occurring level instead of alphabetical?
#63 opened Jan 10, 2023 by taylorreiter
add tidyr::drop_na() to sankey plot function to avoid errors/warnings and inaccurate plots
#62 opened Jan 10, 2023 by taylorreiter
allow users to choose to name from filename or name from query name when plotting things that have multiple samples enhancement New feature or request
#54 opened Jan 3, 2023 by taylorreiter
1
add a new visualization for sourmash taxonomy annotate that's like the plot_gather_classified() plot enhancement New feature or request
#52 opened Jan 3, 2023 by taylorreiter
Coloring strain plots and why I decided not to implement it for now
#51 opened Jan 3, 2023 by taylorreiter
for plot_taxonomy_annotate_ts_alluvial(), add a show_tax argument that allows the user to control which taxa are given alluvial ribbons enhancement New feature or request
#40 opened Nov 16, 2022 by taylorreiter
refactor plot_taxonomy_annotate_ts_alluvial() to allow more flexible column names for time_df. enhancement New feature or request
#39 opened Nov 16, 2022 by taylorreiter
Add visualizations for specific use cases like time series or different groups enhancement New feature or request
#35 opened Nov 4, 2022 by taylorreiter
5
for gather upset plot, add another barchart on top that shows the fraction of sample that was taken up by the intersection enhancement New feature or request
#31 opened Oct 28, 2022 by taylorreiter
switch tax_glom*/agglomeration language to aggregate
#28 opened Oct 25, 2022 by taylorreiter
switch some packages that are Imported (e.g. must be installed) to Suggests (can install and load the library if suggested packages aren't installed)
#15 opened Oct 13, 2022 by taylorreiter
ProTip! Exclude everything labeled bug with -label:bug.