Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Padmet failed to install on Python 3.7 #1

Closed
ArnaudBelcour opened this issue Feb 7, 2019 · 2 comments
Closed

Padmet failed to install on Python 3.7 #1

ArnaudBelcour opened this issue Feb 7, 2019 · 2 comments
Labels
bug Something isn't working

Comments

@ArnaudBelcour
Copy link
Contributor

Old version of cobra (like the one used in padmet: 0.10.1) cannot be installed in Python 3.7 (opencobra/cobrapy#734).

Need to use a newer version of cobra and at least version 0.13.4:

https://github.com/opencobra/cobrapy/blob/0.13.4/release-notes/0.13.4.md

@ArnaudBelcour ArnaudBelcour added the bug Something isn't working label Feb 7, 2019
@ArnaudBelcour
Copy link
Contributor Author

Also there is no python-libsbml wheels for Python 3.7 (sbmlteam/python-libsbml#8). So there is some build error.

At this moment, only the experimental version is compatible:
https://groups.google.com/forum/#!searchin/libsbml-development/3.7%7Csort:date

Available at:
https://pypi.org/project/python-libsbml-experimental/#description

So we have to use this experimental version or wait for the next release.

@ArnaudBelcour
Copy link
Contributor Author

python-libsbml 5.18 has been released and it supports Python 3.7:
http://sbml.org/Software/libSBML/LibSBML_Release_Notes

mezianeAITE added a commit that referenced this issue Apr 19, 2019
Update python-libsbml version (issue #1).
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
bug Something isn't working
Projects
None yet
Development

No branches or pull requests

2 participants