LAM

Tool box used to post process the LAM-HTGTS technique
Refer to LAM.ipynb file to find installation procedure and command lines

Name		Name	Last commit message	Last commit date
Latest commit History 97 Commits
LAM.ipynb		LAM.ipynb
README.md		README.md
break_positions_plot.py		break_positions_plot.py
circos_plot.R		circos_plot.R
distribution_plot.R		distribution_plot.R
extract_loci_sequences.py		extract_loci_sequences.py
filter_non_essential_mapqual.py		filter_non_essential_mapqual.py
filter_reference_genome.py		filter_reference_genome.py
filter_transloc_results.py		filter_transloc_results.py
generate_visualization_files.py		generate_visualization_files.py
karyo_plot.R		karyo_plot.R
lookmod_genome.py		lookmod_genome.py
modify_cytoband.py		modify_cytoband.py
modify_gap.py		modify_gap.py
run_CSReport.py		run_CSReport.py
run_FastQC.py		run_FastQC.py
split_junctions.py		split_junctions.py

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