statgenQTLxT is an R package for fast multi-trait and multi-trial Genome Wide Association Studies (GWAS).
statgenQTLxT has extensive options for summarizing and visualizing
results. It builds on the statgenGWAS
package (for single trait GWAS)
which is available from
CRAN. The package uses data
structures and plots defined in the statgenGWAS
package. It is
recommended to read the vignette of this package, accessible in R via
vignette(package = "statgenGWAS")
or online at
https://biometris.github.io/statgenGWAS/articles/GWAS.html to get a
general idea of those.
For a full description of the theoretical background and a fully worked example see the vignette.
- Install from CRAN:
install.packages("statgenQTLxT")
- Install latest development version from GitHub (requires remotes package):
remotes::install_github("Biometris/statgenQTLxT", ref = "develop", dependencies = TRUE)