Repository of script and data used to publish "Simultaneous quantification of mRNA and protein in single cells reveals post-transcriptional effects of genetic variation" (eLife)
work in progress More complet README coming soon
Scripts are organized in folders per figures as seen on the associate paper, PDF available on this github. These folders also contain imput files (.txt) to facilitate runing the scripts.
"QTL_analysis" folder contains subfolder with inputs and outputs used in the QTL mapping pipeline. Please refers to the pipeline flow chart provided in the folder: "pipeline_flowChart.pdf"
Most scripts are writen in R (version 3.6)