run revdepcheck prior to submissioin

revdep/.gitignore

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+checks
+library
+checks.noindex
+library.noindex
+cloud.noindex
+data.sqlite
+*.html

revdep/README.md

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+# Platform
+
+|field    |value                               |
+|:--------|:-----------------------------------|
+|version  |R version 4.3.2 (2023-10-31)        |
+|os       |macOS Sonoma 14.3.1                 |
+|system   |x86_64, darwin20                    |
+|ui       |RStudio                             |
+|language |(EN)                                |
+|collate  |en_US.UTF-8                         |
+|ctype    |en_US.UTF-8                         |
+|tz       |America/New_York                    |
+|date     |2024-03-11                          |
+|rstudio  |2023.12.1+402 Ocean Storm (desktop) |
+|pandoc   |2.8.0.1 @ /usr/local/bin/pandoc     |
+
+# Dependencies
+
+|package |old   |new        |Δ  |
+|:-------|:-----|:----------|:--|
+|LDlinkR |1.3.0 |1.3.0.9002 |*  |
+
+# Revdeps
+
+## Failed to check (1)
+
+|package |version |error |warning |note |
+|:-------|:-------|:-----|:-------|:----|
+|GRaNIE  |?       |      |        |     |
+

revdep/cran.md

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+## revdepcheck results
+
+We checked 2 reverse dependencies (1 from CRAN + 1 from Bioconductor), comparing R CMD check results across CRAN and dev versions of this package.
+
+ * We saw 0 new problems
+ * We failed to check 0 packages
+

revdep/failures.md

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+# GRaNIE
+
+<details>
+
+* Version: 
+* GitHub: https://github.com/CBIIT/LDlinkR
+* Source code: NA
+* Number of recursive dependencies: 0
+
+</details>
+
+## Error before installation
+
+### Devel
+
+```
+
+  There are binary versions available but the source versions are later:
+           binary source needs_compilation
+digest     0.6.34 0.6.35              TRUE
+tidyselect  1.2.0  1.2.1              TRUE
+
+  Binaries will be installed
+
+
+Error in download.file(url, destfile, method, mode = "wb", ...) : 
+  cannot open URL 'https://cloud.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.3/abind_1.4-5.tgz'
+In addition: Warning messages:
+1: In download.file(url, destfile, method, mode = "wb", ...) :
+  URL 'https://cloud.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.3/abind_1.4-5.tgz': status was 'SSL connect error'
+2: In download.file(url, destfile, method, mode = "wb", ...) :
+  URL 'https://cloud.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.3/abind_1.4-5.tgz': status was 'SSL connect error'
+Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
+  download of package ‘abind’ failed
+Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
+...
+2: In download.file(url, destfile, method, mode = "wb", ...) :
+  downloaded length 0 != reported length 0
+3: In download.file(url, destfile, method, mode = "wb", ...) :
+  URL 'https://bioconductor.org/packages/3.18/data/annotation/src/contrib/BSgenome.Rnorvegicus.UCSC.rn7_1.4.3.tar.gz': Timeout of 60 seconds was reached
+4: In download.file(url, destfile, method, mode = "wb", ...) :
+  URL 'https://bioconductor.org/packages/3.18/data/annotation/src/contrib/BSgenome.Rnorvegicus.UCSC.rn7_1.4.3.tar.gz': Timeout of 60 seconds was reached
+Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
+  download of package ‘BSgenome.Rnorvegicus.UCSC.rn7’ failed
+Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
+  download of package ‘BSgenome.Rnorvegicus.UCSC.rn7’ failed
+
+
+```
+### CRAN
+
+```
+
+  There are binary versions available but the source versions are later:
+           binary source needs_compilation
+digest     0.6.34 0.6.35              TRUE
+tidyselect  1.2.0  1.2.1              TRUE
+
+  Binaries will be installed
+
+
+Error in download.file(url, destfile, method, mode = "wb", ...) : 
+  cannot open URL 'https://cloud.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.3/abind_1.4-5.tgz'
+In addition: Warning messages:
+1: In download.file(url, destfile, method, mode = "wb", ...) :
+  URL 'https://cloud.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.3/abind_1.4-5.tgz': status was 'SSL connect error'
+2: In download.file(url, destfile, method, mode = "wb", ...) :
+  URL 'https://cloud.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.3/abind_1.4-5.tgz': status was 'SSL connect error'
+Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
+  download of package ‘abind’ failed
+Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
+...
+2: In download.file(url, destfile, method, mode = "wb", ...) :
+  downloaded length 0 != reported length 0
+3: In download.file(url, destfile, method, mode = "wb", ...) :
+  URL 'https://bioconductor.org/packages/3.18/data/annotation/src/contrib/BSgenome.Rnorvegicus.UCSC.rn7_1.4.3.tar.gz': Timeout of 60 seconds was reached
+4: In download.file(url, destfile, method, mode = "wb", ...) :
+  URL 'https://bioconductor.org/packages/3.18/data/annotation/src/contrib/BSgenome.Rnorvegicus.UCSC.rn7_1.4.3.tar.gz': Timeout of 60 seconds was reached
+Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
+  download of package ‘BSgenome.Rnorvegicus.UCSC.rn7’ failed
+Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
+  download of package ‘BSgenome.Rnorvegicus.UCSC.rn7’ failed
+
+
+```

revdep/problems.md

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+*Wow, no problems at all. :)*