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CMPG - University of Bern

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  1. signet signet Public

    An R package to detect selection in biological pathways

    R 14 6

  2. polysel polysel Public

    Pipeline to detect polygenic selection in gene sets

    HTML 6 3

  3. ADMRE ADMRE Public

    Material used in the paper "On the accumulation of deleterious mutations during range expansions"

    C++ 3 1

  4. pathways pathways Public

    2

  5. vole_genome_analysis vole_genome_analysis Public

    Forked from agouy/vole_genome_analysis

    Material for the analysis of Microtus whole genomes

    R 2 1

  6. originsEarlyFarmers originsEarlyFarmers Public

    Code for Marchi et al. paper

    Shell 2 2

Repositories

Showing 10 of 11 repositories
  • simpLAI Public

    Local ancestry inference from small reference panels

    CMPG/simpLAI’s past year of commit activity
    C++ 2 0 0 0 Updated Apr 23, 2024
  • signet Public

    An R package to detect selection in biological pathways

    CMPG/signet’s past year of commit activity
    R 14 6 1 0 Updated Jan 19, 2024
  • polysel Public

    Pipeline to detect polygenic selection in gene sets

    CMPG/polysel’s past year of commit activity
    HTML 6 BSD-2-Clause 3 0 0 Updated Nov 23, 2023
  • sfspool Public
    CMPG/sfspool’s past year of commit activity
    Smarty 1 0 0 0 Updated Sep 14, 2023
  • genomicSurfing Public

    Scripts to simulate and analyse genomic diversity evolution during a range expansion

    CMPG/genomicSurfing’s past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Nov 22, 2022
  • originsEarlyFarmers Public

    Code for Marchi et al. paper

    CMPG/originsEarlyFarmers’s past year of commit activity
    Shell 2 GPL-3.0 2 0 0 Updated Apr 28, 2022
  • vole_genome_analysis Public Forked from agouy/vole_genome_analysis

    Material for the analysis of Microtus whole genomes

    CMPG/vole_genome_analysis’s past year of commit activity
    R 2 2 0 0 Updated Apr 20, 2021
  • fsc_shiny Public

    Shiny application to facilitate the interpretation of fastsimcoal results.

    CMPG/fsc_shiny’s past year of commit activity
    R 1 1 0 0 Updated Apr 11, 2021
  • ExpansionLoad_Bacteria Public
    CMPG/ExpansionLoad_Bacteria’s past year of commit activity
    0 0 0 0 Updated Aug 15, 2017
  • pathways Public
    CMPG/pathways’s past year of commit activity
    2 0 0 0 Updated Mar 1, 2017
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