This repository has been archived by the owner on Feb 6, 2024. It is now read-only.
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This is just minor cosmetic changes. Some LM models (e.g. 3.3a = Kimura 3 parameter model) have full symmetry - they treat all base pairings equally. It makes no sense for such a model to have "RY", "MK" or "WS" as part of the name. This fix ensures it doesn't.
The real purpose of this is to work through how I can get my changes back into Cibiv/liemarkov branch.