Version 1.1.1

Download release

Linux 64bit binary

The binary is statically linked for linux 64bit and should run without installing the dependencies. Before running the binary you should enable executable permissions

wget https://github.com/DecodeGenetics/popvcf/releases/download/v1.1.1/popvcf
chmod a+x popvcf

Release notes

• Support of very large site data fields (>256 kb).
• Backwards compatible changes only.

Version 1.1.0

Download release

Linux 64bit binary

The binary is statically linked for linux 64bit and should run without installing the dependencies. Before running the binary you should enable executable permissions

wget https://github.com/DecodeGenetics/popvcf/releases/download/v1.1.0/popvcf
chmod a+x popvcf

Release notes

• Adds benchmarks to README.
• Adds a tar.gz with source code, including submodules, that can be used for the bioconda package.
• Several code optimizations to speed up both encoding and decoding.
• Minor encoding changes include skipping writing TAB after '&' or '$' for a slightly better compression ratios. If you have some popVCF compressed files, please do not update or decode using popVCF v1.0 and re-encode using popVCF v1.1.

Version 1.0.1

Download release

Linux 64bit binary

The binary is statically linked for linux 64bit and should run without installing the dependencies. Before running the binary you should enable executable permissions

wget https://github.com/DecodeGenetics/popvcf/releases/download/v1.0.1/popvcf
chmod a+x popvcf

Release notes

This is a minor release with no changes made to encoding/decoding scheme, so v1.0.1 can decode files made with v1.0.0 and vice versa.

• Wrapped I/O streams in std::unique_ptr
• Added a benchmark with tabix indexing.
• Several code optimizations. Considerable benefit is seen in "popvcf decode".
• Fixed clang-tidy warning

Version 1.0.0

Download release

Linux 64bit binary

The binary is statically linked for linux 64bit and should run without installing the dependencies. Before running the binary you should enable executable permissions

wget https://github.com/DecodeGenetics/popvcf/releases/download/v1.0.0/popvcf
chmod a+x popvcf

Release notes

Initial version!