Metabolic Modeling Network function: Get Potentially Transferable Metabolites (PTMs)
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[bigg_models_metabolites.txt] Download from http://bigg.ucsd.edu/data_access. It provided the namespace of all bigg collected metabolite ids.
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[get_PTM.py] Modified on the base of https://github.com/mgtools/PhyloMint/blob/master/lib/BuildGraphNetX.py because our results are also from this tool.