GitHub - FelipeLopez2019/Genomic_prediction_Lopez-Hernandez-et-al-2023: This script use the BGLR and GAPIT R-packages. This script is part of the genomic goal of the Kolfaci project in Colombia: Evaluating the Accuracy of Genomic Prediction in Common Bean (Phaseolus vulgaris l.) × Tepary bean (P. acutifolius a. gray) Inter-specific Advanced Lines at the Caribbean Coast of Colombia

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This script use the BGLR and GAPIT R-packages. This script is part of the genomic goal of the Kolfaci project in Colombia: Evaluating the Accuracy of Genomic Prediction in Common Bean (Phaseolus vulgaris l.) × Tepary bean (P. acutifolius a. gray) Inter-specific Advanced Lines at the Caribbean Coast of Colombia

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Name		Name	Last commit message	Last commit date
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GAPIT.Genotype.Numerical.txt		GAPIT.Genotype.Numerical.txt
GP_kolfaci.R		GP_kolfaci.R
Index_YLP_Kolfaci.txt		Index_YLP_Kolfaci.txt
README.txt		README.txt
Yield_KKNimp.hmp.txt		Yield_KKNimp.hmp.txt

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R-Scripts for Genomic Prediction

MODUS OPERANDI

Run the genomic prediction analysis (GP_kolfaci.R).

LIST OF ELEMENTS:

•	The R-script GP_kolfaci.R is related to Genomic Prediction analysis via cross validation
•	The molecular variants dataset in numeric format is named: GAPIT.Genotype.Numerical.txt
•	The molecular variants dataset is named: Yield_KKNimp.hmp.txt
•	The phenotypic data is named: Index_YLP_Kolfaci.txt