[update docs] v2.3.3

GMOD · Jan 11, 2023 · 283e038 · 283e038
1 parent addf7ab
commit 283e038
Show file tree

Hide file tree

Showing 41 changed files with 145 additions and 145 deletions.
diff --git a/lerna.json b/lerna.json
@@ -1,5 +1,5 @@
 {
-  "version": "2.3.2",
+  "version": "2.3.3",
   "npmClient": "yarn",
   "useWorkspaces": true
 }
diff --git a/packages/core/package.json b/packages/core/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/core",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 core libraries used by plugins",
   "keywords": [
     "jbrowse",
@@ -28,9 +28,9 @@
     "build": "tsc -b tsconfig.build.json && cp package.json README.md ../../LICENSE dist/"
   },
   "dependencies": {
-    "@types/clone": "^2.0.0",
     "@babel/runtime": "^7.17.9",
     "@mui/icons-material": "^5.0.1",
+    "@types/clone": "^2.0.0",
     "abortable-promise-cache": "^1.5.0",
     "canvas-sequencer": "^3.1.0",
     "canvas2svg": "^1.0.16",

diff --git a/packages/text-indexing/package.json b/packages/text-indexing/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/text-indexing",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 text indexing for desktop",
   "keywords": [
     "jbrowse",

diff --git a/plugins/alignments/package.json b/plugins/alignments/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-alignments",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 alignments adapters, tracks, etc.",
   "keywords": [
     "jbrowse",

diff --git a/plugins/arc/package.json b/plugins/arc/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-arc",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 arc adapters, tracks, etc.",
   "keywords": [
     "jbrowse",

diff --git a/plugins/authentication/package.json b/plugins/authentication/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-authentication",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 Authentication",
   "keywords": [
     "jbrowse",

diff --git a/plugins/bed/package.json b/plugins/bed/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-bed",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 bed adapters, tracks, etc.",
   "keywords": [
     "jbrowse",

diff --git a/plugins/breakpoint-split-view/package.json b/plugins/breakpoint-split-view/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-breakpoint-split-view",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 breakpoint detail split view",
   "keywords": [
     "jbrowse",

diff --git a/plugins/circular-view/package.json b/plugins/circular-view/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-circular-view",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 circular view",
   "keywords": [
     "jbrowse",

diff --git a/plugins/comparative-adapters/package.json b/plugins/comparative-adapters/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-comparative-adapters",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 comparative adapters",
   "keywords": [
     "jbrowse",

diff --git a/plugins/config/package.json b/plugins/config/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-config",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 config utilities",
   "keywords": [
     "jbrowse",

diff --git a/plugins/data-management/package.json b/plugins/data-management/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-data-management",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 linear genome view",
   "keywords": [
     "jbrowse",

diff --git a/plugins/dotplot-view/package.json b/plugins/dotplot-view/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-dotplot-view",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 dotplot view",
   "keywords": [
     "jbrowse",
@@ -37,9 +37,9 @@
     "clean": "rimraf dist esm *.tsbuildinfo"
   },
   "dependencies": {
-    "@types/normalize-wheel": "^1.0.0",
     "@mui/icons-material": "^5.0.1",
     "@mui/x-data-grid": "^5.0.1",
+    "@types/normalize-wheel": "^1.0.0",
     "clone": "^2.1.2",
     "normalize-wheel": "^1.0.1"
   },

diff --git a/plugins/gccontent/package.json b/plugins/gccontent/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-gccontent",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 gccontent concepts",
   "keywords": [
     "jbrowse",

diff --git a/plugins/gff3/package.json b/plugins/gff3/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-gff3",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 gff3.",
   "keywords": [
     "jbrowse",

diff --git a/plugins/grid-bookmark/package.json b/plugins/grid-bookmark/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-grid-bookmark",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 grid bookmark widget",
   "keywords": [
     "jbrowse",
@@ -37,8 +37,8 @@
     "clean": "rimraf dist esm *.tsbuildinfo"
   },
   "dependencies": {
-    "@types/file-saver": "^2.0.1",
     "@mui/icons-material": "^5.0.1",
+    "@types/file-saver": "^2.0.1",
     "file-saver": "^2.0.0"
   },
   "peerDependencies": {

diff --git a/plugins/gtf/package.json b/plugins/gtf/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-gtf",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 gtf feature adapter",
   "keywords": [
     "jbrowse",

diff --git a/plugins/hic/package.json b/plugins/hic/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-hic",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 hic adapters, tracks, etc.",
   "keywords": [
     "jbrowse",

diff --git a/plugins/jobs-management/package.json b/plugins/jobs-management/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-jobs-management",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 jobs management",
   "keywords": [
     "jbrowse",
@@ -37,7 +37,7 @@
     "clean": "rimraf dist esm *.tsbuildinfo"
   },
   "dependencies": {
-    "@jbrowse/text-indexing": "^2.3.2",
+    "@jbrowse/text-indexing": "^2.3.3",
     "@mui/icons-material": "^5.0.0"
   },
   "peerDependencies": {

diff --git a/plugins/legacy-jbrowse/package.json b/plugins/legacy-jbrowse/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-legacy-jbrowse",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 plugin for connecting to and reading JBrowse 1 data",
   "keywords": [
     "jbrowse",

diff --git a/plugins/linear-comparative-view/package.json b/plugins/linear-comparative-view/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-linear-comparative-view",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 linear comparative view",
   "keywords": [
     "jbrowse",

diff --git a/plugins/linear-genome-view/package.json b/plugins/linear-genome-view/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-linear-genome-view",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 linear genome view",
   "keywords": [
     "jbrowse",
@@ -39,10 +39,10 @@
     "useSrc": "node ../../scripts/useSrc.js"
   },
   "dependencies": {
-    "@types/normalize-wheel": "^1.0.0",
-    "@types/file-saver": "^2.0.1",
     "@mui/icons-material": "^5.0.1",
     "@popperjs/core": "^2.11.0",
+    "@types/file-saver": "^2.0.1",
+    "@types/normalize-wheel": "^1.0.0",
     "clone": "^2.1.2",
     "clsx": "^1.0.4",
     "copy-to-clipboard": "^3.3.1",

diff --git a/plugins/lollipop/package.json b/plugins/lollipop/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-lollipop",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 plugin for lollipops",
   "keywords": [
     "jbrowse",

diff --git a/plugins/menus/package.json b/plugins/menus/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-menus",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 basic menus",
   "keywords": [
     "jbrowse",

diff --git a/plugins/rdf/package.json b/plugins/rdf/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-rdf",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 RDF resources",
   "keywords": [
     "jbrowse",

diff --git a/plugins/sequence/package.json b/plugins/sequence/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-sequence",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 sequence adapters, tracks, etc.",
   "keywords": [
     "jbrowse",

diff --git a/plugins/spreadsheet-view/package.json b/plugins/spreadsheet-view/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-spreadsheet-view",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 spreadsheet view",
   "keywords": [
     "jbrowse",
@@ -39,7 +39,7 @@
   "dependencies": {
     "@gmod/bgzf-filehandle": "^1.4.3",
     "@gmod/vcf": "^5.0.9",
-    "@jbrowse/plugin-variants": "^2.3.2",
+    "@jbrowse/plugin-variants": "^2.3.3",
     "@mui/icons-material": "^5.0.1",
     "csvtojson": "^2.0.10"
   },

diff --git a/plugins/sv-inspector/package.json b/plugins/sv-inspector/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-sv-inspector",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 SV inspector view",
   "keywords": [
     "jbrowse",

diff --git a/plugins/svg/package.json b/plugins/svg/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-svg",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 plugin for svg features",
   "keywords": [
     "jbrowse",

diff --git a/plugins/text-indexing/package.json b/plugins/text-indexing/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-text-indexing",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 text indexing rpc method",
   "keywords": [
     "jbrowse",
@@ -37,7 +37,7 @@
     "clean": "rimraf dist esm *.tsbuildinfo"
   },
   "dependencies": {
-    "@jbrowse/text-indexing": "^2.3.2"
+    "@jbrowse/text-indexing": "^2.3.3"
   },
   "peerDependencies": {
     "@jbrowse/core": "^2.0.0",

diff --git a/plugins/trix/package.json b/plugins/trix/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-trix",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 trix text search adapter",
   "keywords": [
     "jbrowse",

diff --git a/plugins/variants/package.json b/plugins/variants/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-variants",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 variant adapters, tracks, etc.",
   "keywords": [
     "jbrowse",

diff --git a/plugins/wiggle/package.json b/plugins/wiggle/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-wiggle",
-  "version": "2.3.2",
+  "version": "2.3.3",
   "description": "JBrowse 2 wiggle adapters, tracks, etc.",
   "keywords": [
     "jbrowse",