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@GenomeNet

GenomeNet

Deep Learning Resource for Genomics

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  1. deepG deepG Public

    DeepG, or 'Deep Genomics', is a R library which allows to train and apply deep neural networks on genomic datasets

    R 28 7

  2. Architect Architect Public

    GenomeNet Architect: Bayesian Optimization of Genome Sequence Analysis Deep Learning Models.

    R 3

  3. Self-GenomeNet Self-GenomeNet Public

    A method that utilizes unlabeled genomic data to address the challenge of limited data availability through self-training

    R 7

  4. model_recipes model_recipes Public

    GenomeNet conda recipes

    Python

Repositories

Showing 10 of 25 repositories
  • deepG Public

    DeepG, or 'Deep Genomics', is a R library which allows to train and apply deep neural networks on genomic datasets

    GenomeNet/deepG’s past year of commit activity
    R 28 7 0 0 Updated Nov 8, 2024
  • microbe.cards Public

    microbe.cards is an auto-generated wiki for microbes, powered by large language models (LLMs). It provides LLM-derived characterizations of phenotypes and properties for over 12,000 bacterial species, offering researchers a quick reference tool for microbial information synthesized from diverse sources.

    GenomeNet/microbe.cards’s past year of commit activity
    Python 0 0 12 0 Updated Nov 1, 2024
  • crispr_data Public
    GenomeNet/crispr_data’s past year of commit activity
    Python 0 0 0 0 Updated Oct 8, 2024
  • SequenceBrowser Public

    GenomeNet Sequence Browser

    GenomeNet/SequenceBrowser’s past year of commit activity
    Python 0 0 0 0 Updated Oct 6, 2024
  • microbeLLM Public

    MicrobeLLM is a Python tool that harnesses the power of large language models (LLMs) for microbial phenotype prediction.

    GenomeNet/microbeLLM’s past year of commit activity
    Python 0 0 2 0 Updated Sep 25, 2024
  • Muench_et_al_2024 Public

    Code to reproduce Figures and Tables for the Münch et al. 2024 manuscript

    GenomeNet/Muench_et_al_2024’s past year of commit activity
    R 0 0 0 1 Updated Sep 17, 2024
  • Labs Public

    genomenet.de platform

    GenomeNet/Labs’s past year of commit activity
    TypeScript 0 0 0 0 Updated Sep 12, 2024
  • BacteriaNet Public

    Prediction of bacterial phenotypes using deep learning

    GenomeNet/BacteriaNet’s past year of commit activity
    R 1 0 0 0 Updated Aug 22, 2024
  • VirusNet Public

    Prediction of viruses and their genus taxonomy using deep learning

    GenomeNet/VirusNet’s past year of commit activity
    R 0 0 0 0 Updated Jul 1, 2024
  • Architect Public

    GenomeNet Architect: Bayesian Optimization of Genome Sequence Analysis Deep Learning Models.

    GenomeNet/Architect’s past year of commit activity
    R 3 0 1 0 Updated Mar 28, 2024
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