Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

feat(puffin): implement CachedPuffinReader #4209

Merged
merged 4 commits into from
Jun 25, 2024

Conversation

zhongzc
Copy link
Contributor

@zhongzc zhongzc commented Jun 25, 2024

I hereby agree to the terms of the GreptimeDB CLA.

Refer to a related PR or issue link (optional)

#4193

What's changed and what's your intention?

Cooperate with CacheManager to implement CachedPuffinWriter

Checklist

  • I have written the necessary rustdoc comments.
  • I have added the necessary unit tests and integration tests.
  • This PR requires documentation updates.

Summary by CodeRabbit

  • New Features

    • Introduced a new module to manage file access and metadata within the Puffin system.
    • Added support for handling errors with detailed messages and specific variants.
  • Enhancements

    • Improved the file reading and writing functionality with a new CachedPuffinReader.
    • Enhanced metadata management for directories and files, improving data organization and retrieval.
  • Bug Fixes

    • Fixed issues related to file key mismatches and index out-of-bounds errors.
    • Restructured module imports for better maintainability and clarity.

Signed-off-by: Zhenchi <zhongzc_arch@outlook.com>
Signed-off-by: Zhenchi <zhongzc_arch@outlook.com>
Signed-off-by: Zhenchi <zhongzc_arch@outlook.com>
@zhongzc zhongzc requested a review from a team as a code owner June 25, 2024 09:19
Copy link
Contributor

coderabbitai bot commented Jun 25, 2024

Walkthrough

The recent updates to the puffin codebase introduce new error variants for more granular error handling, add a new module for file access, restructure the cached puffin manager, and implement new functionalities for directory and file metadata management. These enhancements aim to improve error management, streamline code structure, and enhance file handling capabilities within the puffin system.

Changes

Files Summary
src/puffin/src/error.rs Added new error variants BlobNotFound, BlobIndexOutOfBound, and FileKeyNotMatch.
src/puffin/src/puffin_manager.rs Added the new file_accessor module.
cached_puffin_manager.rs Restructured module imports; removed directory and file metadata declarations.
dir_meta.rs Defined DirMetadata and DirFileMetadata structs.
reader.rs Introduced CachedPuffinReader struct implementing the PuffinReader trait.
writer.rs Restructured import statements; added new method to CachedPuffinWriter.
file_accessor.rs Added PuffinFileAccessor trait for opening readers and writers for puffin files.

Sequence Diagram(s)

sequenceDiagram
    participant Client
    participant CachedPuffinReader
    participant CacheManager
    participant FileAccessor

    Client->>+CachedPuffinReader: Request Blob
    CachedPuffinReader->>+CacheManager: Retrieve Blob from Cache
    CacheManager-->>-CachedPuffinReader: Blob
    CachedPuffinReader->>+FileAccessor: Decompress Blob
    FileAccessor-->>-CachedPuffinReader: Decompressed Blob
    CachedPuffinReader-->>-Client: Blob Data
Loading

Poem

In the world of puffin's code, so bright and vast,
New errors catch issues, clever and fast.
Modules reshuffled, metadata in place,
Readers and writers dancing in grace.
With every bit, the system grows,
A journey of code, see how it flows. 🐇✨


Thank you for using CodeRabbit. We offer it for free to the OSS community and would appreciate your support in helping us grow. If you find it useful, would you consider giving us a shout-out on your favorite social media?

Share
Tips

Chat

There are 3 ways to chat with CodeRabbit:

  • Review comments: Directly reply to a review comment made by CodeRabbit. Example:
    • I pushed a fix in commit <commit_id>.
    • Generate unit testing code for this file.
    • Open a follow-up GitHub issue for this discussion.
  • Files and specific lines of code (under the "Files changed" tab): Tag @coderabbitai in a new review comment at the desired location with your query. Examples:
    • @coderabbitai generate unit testing code for this file.
    • @coderabbitai modularize this function.
  • PR comments: Tag @coderabbitai in a new PR comment to ask questions about the PR branch. For the best results, please provide a very specific query, as very limited context is provided in this mode. Examples:
    • @coderabbitai generate interesting stats about this repository and render them as a table.
    • @coderabbitai show all the console.log statements in this repository.
    • @coderabbitai read src/utils.ts and generate unit testing code.
    • @coderabbitai read the files in the src/scheduler package and generate a class diagram using mermaid and a README in the markdown format.
    • @coderabbitai help me debug CodeRabbit configuration file.

Note: Be mindful of the bot's finite context window. It's strongly recommended to break down tasks such as reading entire modules into smaller chunks. For a focused discussion, use review comments to chat about specific files and their changes, instead of using the PR comments.

CodeRabbit Commands (invoked as PR comments)

  • @coderabbitai pause to pause the reviews on a PR.
  • @coderabbitai resume to resume the paused reviews.
  • @coderabbitai review to trigger an incremental review. This is useful when automatic reviews are disabled for the repository.
  • @coderabbitai full review to do a full review from scratch and review all the files again.
  • @coderabbitai summary to regenerate the summary of the PR.
  • @coderabbitai resolve resolve all the CodeRabbit review comments.
  • @coderabbitai configuration to show the current CodeRabbit configuration for the repository.
  • @coderabbitai help to get help.

Additionally, you can add @coderabbitai ignore anywhere in the PR description to prevent this PR from being reviewed.

CodeRabbit Configration File (.coderabbit.yaml)

  • You can programmatically configure CodeRabbit by adding a .coderabbit.yaml file to the root of your repository.
  • Please see the configuration documentation for more information.
  • If your editor has YAML language server enabled, you can add the path at the top of this file to enable auto-completion and validation: # yaml-language-server: $schema=https://coderabbit.ai/integrations/schema.v2.json

Documentation and Community

  • Visit our Documentation for detailed information on how to use CodeRabbit.
  • Join our Discord Community to get help, request features, and share feedback.
  • Follow us on X/Twitter for updates and announcements.

@github-actions github-actions bot added the docs-not-required This change does not impact docs. label Jun 25, 2024
Copy link
Contributor

@coderabbitai coderabbitai bot left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Actionable comments posted: 0

Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

Commits

Files that changed from the base of the PR and between 1204477 and 9694925.

Files selected for processing (7)
  • src/puffin/src/error.rs (2 hunks)
  • src/puffin/src/puffin_manager.rs (1 hunks)
  • src/puffin/src/puffin_manager/cached_puffin_manager.rs (1 hunks)
  • src/puffin/src/puffin_manager/cached_puffin_manager/dir_meta.rs (1 hunks)
  • src/puffin/src/puffin_manager/cached_puffin_manager/reader.rs (1 hunks)
  • src/puffin/src/puffin_manager/cached_puffin_manager/writer.rs (2 hunks)
  • src/puffin/src/puffin_manager/file_accessor.rs (1 hunks)
Files skipped from review due to trivial changes (2)
  • src/puffin/src/puffin_manager.rs
  • src/puffin/src/puffin_manager/cached_puffin_manager.rs
Additional comments not posted (9)
src/puffin/src/puffin_manager/cached_puffin_manager/dir_meta.rs (2)

19-21: Well-defined structure for directory metadata.

The DirMetadata struct is well-defined with appropriate serialization and debugging capabilities. It is crucial to ensure that the files vector is handled efficiently in operations to maintain performance.


25-35: Well-defined structure for file metadata within a directory.

The DirFileMetadata struct includes all necessary fields for managing file metadata. The use of String for relative_path and key is appropriate, but ensure that these fields are consistently validated when used to prevent issues like path traversal or key mismatches.

src/puffin/src/puffin_manager/file_accessor.rs (2)

24-33: Appropriate definition of the PuffinFileAccessor trait.

The trait is well-defined with asynchronous methods for reader and writer creation, leveraging Rust's async capabilities and type constraints to ensure compatibility with async I/O operations. It is important that error handling is robust in the implementations of these methods to prevent runtime issues.


35-36: Use of Arc for thread safety and shared ownership.

The PuffinFileAccessorRef type alias using Arc is appropriate for ensuring thread safety and shared ownership across asynchronous tasks. This is crucial in a multi-threaded environment where multiple tasks might access file accessor instances.

src/puffin/src/error.rs (3)

201-206: Proper definition of the BlobNotFound error variant.

The BlobNotFound variant is correctly implemented with necessary context information. It is important that this error is handled gracefully in calling code to provide clear feedback to the user or system about missing data.


208-214: Well-defined error variant for blob index issues.

The BlobIndexOutOfBound variant provides detailed context for debugging issues related to blob indexing. This will enhance error reporting and debugging capabilities when blob indices are incorrectly accessed.


216-222: Accurate implementation of the FileKeyNotMatch error variant.

The FileKeyNotMatch error variant is crucial for detecting mismatches between expected and actual file keys, which can prevent data corruption and unauthorized access. Ensure that this error is used effectively in file operations to safeguard data integrity.

src/puffin/src/puffin_manager/cached_puffin_manager/writer.rs (1)

Line range hint 33-64: Well-structured and robust implementation of CachedPuffinWriter.

The CachedPuffinWriter struct is appropriately defined with fields that are essential for managing puffin file writing. The constructor method new is well-implemented, ensuring that all fields are initialized properly. It is crucial that the HashSet used for tracking written blob keys is managed efficiently to prevent memory bloat.

src/puffin/src/puffin_manager/cached_puffin_manager/reader.rs (1)

36-60: Effective implementation of CachedPuffinReader.

The CachedPuffinReader struct is well-defined with essential fields for managing puffin file reading. The constructor method new is correctly implemented, ensuring proper initialization of all fields. It is important to ensure that the cache manager and file accessor are utilized efficiently to optimize read performance and resource usage.

Copy link

codecov bot commented Jun 25, 2024

Codecov Report

Attention: Patch coverage is 0% with 133 lines in your changes missing coverage. Please review.

Project coverage is 84.64%. Comparing base (1e815dd) to head (0f70f9b).
Report is 4 commits behind head on main.

Additional details and impacted files
@@            Coverage Diff             @@
##             main    #4209      +/-   ##
==========================================
- Coverage   85.02%   84.64%   -0.39%     
==========================================
  Files        1033     1038       +5     
  Lines      181960   182769     +809     
==========================================
- Hits       154707   154697      -10     
- Misses      27253    28072     +819     

Signed-off-by: Zhenchi <zhongzc_arch@outlook.com>
@zhongzc zhongzc enabled auto-merge June 25, 2024 12:13
Copy link
Contributor

@coderabbitai coderabbitai bot left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Actionable comments posted: 0

Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

Commits

Files that changed from the base of the PR and between 9694925 and 0f70f9b.

Files selected for processing (1)
  • src/puffin/src/puffin_manager/cached_puffin_manager/reader.rs (1 hunks)
Files skipped from review as they are similar to previous changes (1)
  • src/puffin/src/puffin_manager/cached_puffin_manager/reader.rs

@zhongzc zhongzc added this pull request to the merge queue Jun 25, 2024
Merged via the queue into GreptimeTeam:main with commit 5dde148 Jun 25, 2024
51 checks passed
@zhongzc zhongzc deleted the zhongzc/puffin-dir-3 branch June 25, 2024 12:43
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
docs-not-required This change does not impact docs.
Projects
None yet
Development

Successfully merging this pull request may close these issues.

3 participants