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[TMI'24] Histopathology Whole Slide Image Analysis with Heterogeneous Graph Representation Learning

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PAM

Unleash the Power of State Space Model for Whole Slide Image with Local Aware Scanning and Importance Resampling

Model Structure

Hierarchical Feature Extraction

# Create regions with resolution of 4096x4096
python create_patches_fp.py

# Extract feature for regions (4096x4096) and patches (512x512)
python extract_features_fp.py

Training

bash scripts/train_pam.sh

Acknowledgements

The project was built on top of amazing repositories such as CLAM, VMamba. We thank the authors and developers for their contribution.

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[TMI'24] Histopathology Whole Slide Image Analysis with Heterogeneous Graph Representation Learning

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