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HorvathLab

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  1. NGS NGS Public

    Next-Gen Sequencing tools from the Horvath Lab

    Python 39 16

  2. ReQTL ReQTL Public

    ReQTL: Identifying correlations between expressed SNVs and gene expression using RNA-sequencing data

    R 10 4

  3. SNPlice SNPlice Public

    SNPlice finds and evaluates the co-occurrence of single-nucleotide-polymorphisms (SNP) and altered splicing in next-gen mRNA sequence reads.

    Python 2

  4. RNA2DNAlign RNA2DNAlign Public

    RNA2DNAlign evaluates evidence for asymmetric allele distribution in next-gen sequencing reads of DNA and RNA samples from the same individual

    Python 1

  5. MATLAB_Rewrite MATLAB_Rewrite Public

    Python

  6. RsQTL RsQTL Public

    R 1

Repositories

Showing 7 of 7 repositories
  • NGS Public

    Next-Gen Sequencing tools from the Horvath Lab

    HorvathLab/NGS’s past year of commit activity
    Python 39 MIT 16 11 0 Updated Nov 5, 2024
  • scesnv-catalog Public

    Single-cell expressed SNV catalog

    HorvathLab/scesnv-catalog’s past year of commit activity
    JavaScript 0 0 0 0 Updated Aug 14, 2024
  • ReQTL Public

    ReQTL: Identifying correlations between expressed SNVs and gene expression using RNA-sequencing data

    HorvathLab/ReQTL’s past year of commit activity
    R 10 4 0 0 Updated Aug 27, 2020
  • RsQTL Public
    HorvathLab/RsQTL’s past year of commit activity
    R 0 1 0 0 Updated Jan 22, 2020
  • RNA2DNAlign Public

    RNA2DNAlign evaluates evidence for asymmetric allele distribution in next-gen sequencing reads of DNA and RNA samples from the same individual

    HorvathLab/RNA2DNAlign’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Aug 30, 2017
  • HorvathLab/MATLAB_Rewrite’s past year of commit activity
    Python 0 0 0 0 Updated May 8, 2017
  • SNPlice Public

    SNPlice finds and evaluates the co-occurrence of single-nucleotide-polymorphisms (SNP) and altered splicing in next-gen mRNA sequence reads.

    HorvathLab/SNPlice’s past year of commit activity
    Python 2 MIT 0 0 0 Updated Jan 19, 2017

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