Skip to content

Network model .json file for the Langerhans Cell (LC), Melanoma and combined models first described in Howell, Davies et al., Science Advances 2023.

License

Notifications You must be signed in to change notification settings

JFisherLab/Melanoma-LC

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

7 Commits
 
 
 
 
 
 
 
 
 
 

Repository files navigation

Localised Immune Surveillance of Primary Melanoma in the Skin Deciphered through Executable Modelling

Overview

Network model .json file for the Langerhans Cell (LC), Melanoma and combined models first described in Howell, Davies et al., Science Advances 2023.

image

The LC model predicts the behaviour of these cells in response to extracellular signalling molecules, while the Melanoma model predicts the behaviour of tumour cells in response to somatic mutations or targeted therapies. The combined Melanoma-LC model incorporates melanoma-derived TNF signalling to predict LC behaviour in the skin adjacent to tumour cells. The models are Qualitative Networks (QN), built and analysed using Bio Model Analyzer (BMA).

Instructions

The .json file for each of the networks can be used to explore the models in the Bio Model Analyzer (BMA) tool. To import the network JSON file, use the "Import" button in the left hand tooltab.

image

The model can also be explored using a local installation of BMA. BMA can currently only be built on Windows.

Citing

Please cite this work as:

Howell, R., Davies J., et al. Localized immune surveillance of primary melanoma in the skin deciphered through executable modeling. Science Advances 9, 15 (2023). https://doi.org/10.1126/sciadv.add1992

This repository is archived on Zenodo at DOI.

License

This project is licensed under the MIT License - see the LICENSE file for details.

About

Network model .json file for the Langerhans Cell (LC), Melanoma and combined models first described in Howell, Davies et al., Science Advances 2023.

Resources

License

Stars

Watchers

Forks