SCP

Python implementation of the Specific Co-Expression Perturbation (SCP) based samples multi-classification for cancer staging, grading and subtyping. It includes co-expression network construction, specific co-expression identification, co-expression perturbation based label prediction of cancer sample.

Cite

If you make use of this code in your own work, please cite our paper:

@inproceedings{jiang2019multi,
  title={Multi-Classification of Cancer Samples Based on Co-Expression Analyses},
  author={Jiang, Hongyang and Huang, Qiang and Chen, Liang and Li, Zhi and Xu, Ying and Sun, Huiyan and Chang, Yi},
  booktitle={2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)},
  pages={197--201},
  year={2019},
  organization={IEEE}
}