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helixGlyphs.mrml
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helixGlyphs.mrml
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<MRML>
<Selection
id="vtkMRMLSelectionNode1" name="vtkMRMLSelectionNode1" hideFromEditors="true" selectable="true" activeVolumeID="vtkMRMLDiffusionTensorVolumeNode1" activeLabelVolumeID="NULL" activeFiducialListID="NULL" activeROIListID="NULL" activeCameraID="NULL" activeViewID="NULL" activeLayoutID="vtkMRMLLayoutNode1"></Selection>
<Interaction
id="vtkMRMLInteractionNode1" name="vtkMRMLInteractionNode1" hideFromEditors="true" selectable="true" currentInteractionMode="ViewTransform" lastInteractionMode="ViewTransform"></Interaction>
<Layout
id="vtkMRMLLayoutNode1" name="vtkMRMLLayoutNode1" hideFromEditors="true" selectable="true" currentViewArrangement="-1" guiPanelVisibility="1" bottomPanelVisiblity ="1" guiPanelLR="0" numberOfCompareViewRows="0" numberOfCompareViewColumns="0"></Layout>
<View
id="vtkMRMLViewNode1" name="vtkMRMLViewNode1" hideFromEditors="true" selectable="true" active="false" fieldOfView="200" letterSize="0.05" boxVisible="true" fiducialsVisible="true" fiducialLabelsVisible="true" axisLabelsVisible="true" backgroundColor="0.70196 0.70196 0.90588" animationMode="Off" viewAxisMode="LookFrom" spinDegrees="2" spinMs="5" spinDirection="YawLeft" rotateDegrees="5" rockLength="200" rockCount="0" stereoType="NoStereo" renderMode="Perspective"></View>
<Camera
id="vtkMRMLCameraNode1" name="vtkMRMLCameraNode1" hideFromEditors="true" selectable="true" position="32.3317 230.823 9.10205" focalPoint="0 0 0" viewUp="0.0716138 -0.0493148 0.996213" parallelProjection="false" parallelScale="1" active="false"></Camera>
<TGParameters
id="vtkMRMLTumorGrowthNode1" name="vtkMRMLTumorGrowthNode1" hideFromEditors="true" selectable="true" ROIMin="-1 -1 -1" ROIMax="-1 -1 -1" SegmentThresholdMin="-1" SegmentThresholdMax="-1" Analysis_Intensity_Flag="0" Analysis_Deformable_Flag="0"></TGParameters>
<VolumeRenderingSelection
id="vtkMRMLVolumeRenderingSelectionNode1" name="vtkMRMLVolumeRenderingSelectionNode1" hideFromEditors="true" selectable="true" activeVolumeID="NULL" activeVolumeRenderingID="NULL"></VolumeRenderingSelection>
<Slice
id="vtkMRMLSliceNode3" name="vtkMRMLSliceNode3" hideFromEditors="true" selectable="true" fieldOfView="196.875 231.72 12.5" dimensions="339 399 1" layoutGridRows="1" layoutGridColumns="1" sliceToRAS="-1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1" layoutName="Green" orientation="Coronal" sliceVisibility="true" widgetVisibility="false"></Slice>
<SliceComposite
id="vtkMRMLSliceCompositeNode3" name="vtkMRMLSliceCompositeNode3" hideFromEditors="true" selectable="true" backgroundVolumeID="vtkMRMLDiffusionTensorVolumeNode1" foregroundVolumeID="" labelVolumeID="" labelOpacity="1" linkedControl="0" foregroundGrid="0" backgroundGrid="0" labelGrid="1" fiducialVisibility="1" fiducialLabelVisibility="1" layoutName="Green" annotationMode="All" crosshairMode="NoCrosshair" crosshairBehavior="Normal"></SliceComposite>
<Slice
id="vtkMRMLSliceNode1" name="vtkMRMLSliceNode1" hideFromEditors="true" selectable="true" fieldOfView="196.875 232.406 12.5" dimensions="338 399 1" layoutGridRows="1" layoutGridColumns="1" sliceToRAS="-1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1" layoutName="Red" orientation="Axial" sliceVisibility="true" widgetVisibility="false"></Slice>
<SliceComposite
id="vtkMRMLSliceCompositeNode1" name="vtkMRMLSliceCompositeNode1" hideFromEditors="true" selectable="true" backgroundVolumeID="vtkMRMLDiffusionTensorVolumeNode1" foregroundVolumeID="" labelVolumeID="" labelOpacity="1" linkedControl="0" foregroundGrid="0" backgroundGrid="0" labelGrid="1" fiducialVisibility="1" fiducialLabelVisibility="1" layoutName="Red" annotationMode="All" crosshairMode="NoCrosshair" crosshairBehavior="Normal"></SliceComposite>
<Slice
id="vtkMRMLSliceNode2" name="vtkMRMLSliceNode2" hideFromEditors="true" selectable="true" fieldOfView="196.875 231.72 12.5" dimensions="339 399 1" layoutGridRows="1" layoutGridColumns="1" sliceToRAS="0 0 1 0 -1 0 0 0 0 1 0 0 0 0 0 1" layoutName="Yellow" orientation="Sagittal" sliceVisibility="true" widgetVisibility="false"></Slice>
<SliceComposite
id="vtkMRMLSliceCompositeNode2" name="vtkMRMLSliceCompositeNode2" hideFromEditors="true" selectable="true" backgroundVolumeID="vtkMRMLDiffusionTensorVolumeNode1" foregroundVolumeID="" labelVolumeID="" labelOpacity="1" linkedControl="0" foregroundGrid="0" backgroundGrid="0" labelGrid="1" fiducialVisibility="1" fiducialLabelVisibility="1" layoutName="Yellow" annotationMode="All" crosshairMode="NoCrosshair" crosshairBehavior="Normal"></SliceComposite>
<ScriptedModule
id="vtkMRMLScriptedModuleNode1" name="vtkMRMLScriptedModuleNode1" hideFromEditors="true" selectable="true" ModuleName ="Editor" parameter0= "label 1"></ScriptedModule>
<NRRDStorage
id="vtkMRMLNRRDStorageNode1" name="vtkMRMLNRRDStorageNode1" hideFromEditors="true" selectable="true" fileName="TestData/helix-DTI.nhdr" useCompression="1" readState="0" writeState="0" centerImage="0"></NRRDStorage>
<DiffusionTensorVolumeDisplay
id="vtkMRMLDiffusionTensorVolumeDisplayNode1" name="vtkMRMLDiffusionTensorVolumeDisplayNode1" hideFromEditors="true" selectable="true" color="0.5 0.5 0.5" ambient="0" diffuse="1" specular="0" power="1" opacity="1" visibility="true" clipping="false" backfaceCulling="true" scalarVisibility="false" vectorVisibility="false" tensorVisibility="false" autoScalarRange="true" scalarRange="0 100" colorNodeRef="vtkMRMLColorTableNodeGrey" window="0.574215" level="0.287107" upperThreshold="0" lowerThreshold="0" interpolate="1" autoWindowLevel="1" applyThreshold="0" autoThreshold="0" visualizationMode="0" diffusionTensorDisplayPropertiesNodeID="vtkMRMLDiffusionTensorDisplayPropertiesNode1"></DiffusionTensorVolumeDisplay>
<DiffusionTensorVolume
id="vtkMRMLDiffusionTensorVolumeNode1" name="helix-DTI" hideFromEditors="false" selectable="true" storageNodeRef="vtkMRMLNRRDStorageNode1" displayNodeRef="vtkMRMLDiffusionTensorVolumeDisplayNode1 vtkMRMLDiffusionTensorVolumeSliceDisplayNode1 vtkMRMLDiffusionTensorVolumeSliceDisplayNode2 vtkMRMLDiffusionTensorVolumeSliceDisplayNode3" ijkToRASDirections="1 -0 0 -0 1 -0 0 -0 1 " spacing="3.125 6.25 12.5" origin="-98.4375 -96.875 -93.75" measurementFrame="1 -0 0 -0 1 -0 0 -0 1 " order="2"></DiffusionTensorVolume>
<DiffusionTensorDisplayProperties
id="vtkMRMLDiffusionTensorDisplayPropertiesNode1" name="vtkMRMLDiffusionTensorDisplayPropertiesNode1" hideFromEditors="true" selectable="true" type="-1" glyphGeometry="0" colorGlyphBy="3" glyphScaleFactor="50" glyphEigenvector="1" glyphExtractEigenvalues="1" lineGlyphResolution="20" tubeGlyphRadius="0.1" tubeGlyphNumberOfSides="4" ellipsoidGlyphThetaResolution="9" ellipsoidGlyphPhiResolution="9" superquadricGlyphGamma="1" superquadricGlyphThetaResolution="6" superquadricGlyphPhiResolution="6"></DiffusionTensorDisplayProperties>
<DiffusionTensorDisplayProperties
id="vtkMRMLDiffusionTensorDisplayPropertiesNode2" name="vtkMRMLDiffusionTensorDisplayPropertiesNode2" hideFromEditors="true" selectable="true" type="-1" glyphGeometry="2" colorGlyphBy="3" glyphScaleFactor="50" glyphEigenvector="1" glyphExtractEigenvalues="1" lineGlyphResolution="20" tubeGlyphRadius="0.1" tubeGlyphNumberOfSides="4" ellipsoidGlyphThetaResolution="9" ellipsoidGlyphPhiResolution="9" superquadricGlyphGamma="1" superquadricGlyphThetaResolution="6" superquadricGlyphPhiResolution="6"></DiffusionTensorDisplayProperties>
<DiffusionTensorVolumeSliceDisplayNode
id="vtkMRMLDiffusionTensorVolumeSliceDisplayNode1" name="Red" hideFromEditors="true" selectable="true" color="0.5 0.5 0.5" ambient="0" diffuse="1" specular="0" power="1" opacity="1" visibility="true" clipping="false" backfaceCulling="true" scalarVisibility="true" vectorVisibility="false" tensorVisibility="false" autoScalarRange="true" scalarRange="2.47436e-007 0.474943" colorNodeRef="vtkMRMLColorTableNodeRainbow" colorMode ="1" DiffusionTensorDisplayPropertiesNodeRef="vtkMRMLDiffusionTensorDisplayPropertiesNode2"></DiffusionTensorVolumeSliceDisplayNode>
<DiffusionTensorVolumeSliceDisplayNode
id="vtkMRMLDiffusionTensorVolumeSliceDisplayNode2" name="Yellow" hideFromEditors="true" selectable="true" color="0.5 0.5 0.5" ambient="0" diffuse="1" specular="0" power="1" opacity="1" visibility="true" clipping="false" backfaceCulling="true" scalarVisibility="true" vectorVisibility="false" tensorVisibility="false" autoScalarRange="true" scalarRange="2.47436e-007 0.474994" colorNodeRef="vtkMRMLColorTableNodeRainbow" colorMode ="1" DiffusionTensorDisplayPropertiesNodeRef="vtkMRMLDiffusionTensorDisplayPropertiesNode2"></DiffusionTensorVolumeSliceDisplayNode>
<DiffusionTensorVolumeSliceDisplayNode
id="vtkMRMLDiffusionTensorVolumeSliceDisplayNode3" name="Green" hideFromEditors="true" selectable="true" color="0.5 0.5 0.5" ambient="0" diffuse="1" specular="0" power="1" opacity="1" visibility="true" clipping="false" backfaceCulling="true" scalarVisibility="true" vectorVisibility="false" tensorVisibility="false" autoScalarRange="true" scalarRange="2.47436e-007 0.475037" colorNodeRef="vtkMRMLColorTableNodeRainbow" colorMode ="1" DiffusionTensorDisplayPropertiesNodeRef="vtkMRMLDiffusionTensorDisplayPropertiesNode2"></DiffusionTensorVolumeSliceDisplayNode>
</MRML>