Change of weight edge

C/SERD.py

@@ -0,0 +1,123 @@
+# This file was automatically generated by SWIG (http://www.swig.org).
+# Version 4.0.2
+#
+# Do not make changes to this file unless you know what you are doing--modify
+# the SWIG interface file instead.
+
+from sys import version_info as _swig_python_version_info
+if _swig_python_version_info < (2, 7, 0):
+    raise RuntimeError("Python 2.7 or later required")
+
+# Import the low-level C/C++ module
+if __package__ or "." in __name__:
+    from . import _SERD
+else:
+    import _SERD
+
+try:
+    import builtins as __builtin__
+except ImportError:
+    import __builtin__
+
+def _swig_repr(self):
+    try:
+        strthis = "proxy of " + self.this.__repr__()
+    except __builtin__.Exception:
+        strthis = ""
+    return "<%s.%s; %s >" % (self.__class__.__module__, self.__class__.__name__, strthis,)
+
+
+def _swig_setattr_nondynamic_instance_variable(set):
+    def set_instance_attr(self, name, value):
+        if name == "thisown":
+            self.this.own(value)
+        elif name == "this":
+            set(self, name, value)
+        elif hasattr(self, name) and isinstance(getattr(type(self), name), property):
+            set(self, name, value)
+        else:
+            raise AttributeError("You cannot add instance attributes to %s" % self)
+    return set_instance_attr
+
+
+def _swig_setattr_nondynamic_class_variable(set):
+    def set_class_attr(cls, name, value):
+        if hasattr(cls, name) and not isinstance(getattr(cls, name), property):
+            set(cls, name, value)
+        else:
+            raise AttributeError("You cannot add class attributes to %s" % cls)
+    return set_class_attr
+
+
+def _swig_add_metaclass(metaclass):
+    """Class decorator for adding a metaclass to a SWIG wrapped class - a slimmed down version of six.add_metaclass"""
+    def wrapper(cls):
+        return metaclass(cls.__name__, cls.__bases__, cls.__dict__.copy())
+    return wrapper
+
+
+class _SwigNonDynamicMeta(type):
+    """Meta class to enforce nondynamic attributes (no new attributes) for a class"""
+    __setattr__ = _swig_setattr_nondynamic_class_variable(type.__setattr__)
+
+
+
+def igrid(grid):
+    return _SERD.igrid(grid)
+
+def fill(grid, atoms, reference, sincos, step, probe, nthreads):
+    return _SERD.fill(grid, atoms, reference, sincos, step, probe, nthreads)
+
+def check_protein_neighbours(grid, i, j, k):
+    return _SERD.check_protein_neighbours(grid, i, j, k)
+
+def ses(grid, step, probe, nthreads):
+    return _SERD.ses(grid, step, probe, nthreads)
+
+def define_surface_points(grid, i, j, k):
+    return _SERD.define_surface_points(grid, i, j, k)
+
+def filter_surface(grid, nthreads):
+    return _SERD.filter_surface(grid, nthreads)
+
+def remove_noise_points(grid, i, j, k):
+    return _SERD.remove_noise_points(grid, i, j, k)
+
+def filter_noise_points(grid, nthreads):
+    return _SERD.filter_noise_points(grid, nthreads)
+
+def check_unclustered_neighbours(grid, i, j, k):
+    return _SERD.check_unclustered_neighbours(grid, i, j, k)
+
+def flood_and_fill(grid, i, j, k, tag):
+    return _SERD.flood_and_fill(grid, i, j, k, tag)
+
+def filter_enclosed_regions(grid, step, nthreads):
+    return _SERD.filter_enclosed_regions(grid, step, nthreads)
+
+def _surface(grid, nx, ny, nz, atoms, reference, sincos, step, probe, is_ses, nthreads, verbose):
+    return _SERD._surface(grid, nx, ny, nz, atoms, reference, sincos, step, probe, is_ses, nthreads, verbose)
+class res(object):
+    thisown = property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc="The membership flag")
+    __repr__ = _swig_repr
+    pos = property(_SERD.res_pos_get, _SERD.res_pos_set)
+    next = property(_SERD.res_next_get, _SERD.res_next_set)
+
+    def __init__(self):
+        _SERD.res_swiginit(self, _SERD.new_res())
+    __swig_destroy__ = _SERD.delete_res
+
+# Register res in _SERD:
+_SERD.res_swigregister(res)
+
+
+def create(pos):
+    return _SERD.create(pos)
+
+def insert(head, res_new):
+    return _SERD.insert(head, res_new)
+
+def _interface(grid, pdb, atoms, reference, sincos, step, probe, nthreads, verbose):
+    return _SERD._interface(grid, pdb, atoms, reference, sincos, step, probe, nthreads, verbose)
+
+