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Algorithmen der Sequenzanalyse Seminar


We are presenting the article "Assembly of long, error-prone reads using repeat graphs" by Mikhail Kolmogorov, Jeffrey Yuan, Yu Lin and Pavel A Pevzner published in May 2019.

Poster

Our poster can be downloaded here: https://github.com/LKress/ASA/blob/main/poster/poster.pdf

Presentation

Our presentation can be downloaded here: https://github.com/LKress/ASA/blob/main/presentation/presentation_final.pdf

Manual

Compile documents

Required software:

  • pandoc
  • brave or chromium (if you want to use chromium please make sure to adapt the Makefile)
  • python3 and matplotlib
  • LaTeX or XeLaTeX distribution
  • Metropolis
  • Posterdown

There are the following commands to compile/create the needed documents:

  • make plot creates the result plot

  • make ppt compiles the presentation

  • make post compiles the poster

  • make all to compile everything

Figures

The figures on the poster and the presentation were created using drawio and are modified from the paper of Kolmogorov et al. 2019.