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@LPCDRP

Laboratory for Pathogenesis of Clinical Drug Resistance and Persistence

All of our public projects can be found on GitLab: <https://gitlab.com/LPCDRP>. Some of them are mirrored here

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  1. mummer-extras mummer-extras Public mirror

    extra utilities for working with MUMmer-specific formats

    Python 2 2

  2. motif-variants motif-variants Public mirror

    Detect Creation/Destruction of Sequence Motifs as a Result of Mutations

    Python 1 1

  3. biodiff biodiff Public mirror

    exact comparison of biological sequences

    Shell

  4. vcftools-extras vcftools-extras Public mirror

    extra utilities for manipulating files in variant call format

    Python

  5. vep-extras vep-extras Public mirror

    extra utilities for manipulating variant effect predictor annotations

    Python

  6. biomake biomake Public mirror

    Forked from percyfal/biomake

    Makefile library for bioinformatics programs

    Makefile

Repositories

Showing 10 of 10 repositories
  • hybran Public mirror

    comparative prokaryotic genome annotation

    LPCDRP/hybran’s past year of commit activity
    Python 0 0 0 0 Updated Jun 22, 2024
  • bioconda-recipes Public Forked from bioconda/bioconda-recipes

    Conda recipes for the bioconda channel.

    LPCDRP/bioconda-recipes’s past year of commit activity
    Shell 0 3,296 0 0 Updated Apr 6, 2023
  • Compare-annotations Public Forked from rrwick/Compare-annotations

    A script for comparing two annotations of the same genome

    LPCDRP/Compare-annotations’s past year of commit activity
    Python 0 GPL-3.0 6 0 0 Updated Aug 1, 2022
  • biodiff Public mirror

    exact comparison of biological sequences

    LPCDRP/biodiff’s past year of commit activity
    Shell 0 0 5 0 Updated Jun 14, 2018
  • biomake Public mirror Forked from percyfal/biomake

    Makefile library for bioinformatics programs

    LPCDRP/biomake’s past year of commit activity
    Makefile 0 3 0 0 Updated Feb 14, 2018
  • vcftools-extras Public mirror

    extra utilities for manipulating files in variant call format

    LPCDRP/vcftools-extras’s past year of commit activity
    Python 0 0 0 0 Updated Feb 14, 2018
  • motif-variants Public mirror

    Detect Creation/Destruction of Sequence Motifs as a Result of Mutations

    LPCDRP/motif-variants’s past year of commit activity
    Python 1 1 0 0 Updated Feb 14, 2018
  • pangenome_graphs Public Forked from aswarren/pangenome_graphs

    Constructing pan genome graphs from "protein family" assignments

    LPCDRP/pangenome_graphs’s past year of commit activity
    Python 0 5 0 0 Updated Dec 28, 2017
  • vep-extras Public mirror

    extra utilities for manipulating variant effect predictor annotations

    LPCDRP/vep-extras’s past year of commit activity
    Python 0 0 0 0 Updated Dec 1, 2016
  • mummer-extras Public mirror

    extra utilities for working with MUMmer-specific formats

    LPCDRP/mummer-extras’s past year of commit activity
    Python 2 2 0 0 Updated Oct 27, 2016

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