Error Installing batchelor

[davisidarta]

Hello there batchelor Team!

I'm trying to install batchelor. However, when I run devtools::install_github("LTLA/batchelor"), I get the following error output:

Downloading GitHub repo LTLA/batchelor@master
Skipping 2 packages not available: BiocNeighbors, BiocSingular
Skipping 11 packages ahead of CRAN: beachmat, BiocGenerics, BiocParallel, DelayedArray, gtable, HDF5Array, IRanges, rhdf5, Rhdf5lib, rlang, S4Vectors
Installing 17 packages: Biobase, BiocSingular, DelayedMatrixStats, edgeR, GenomeInfoDb, GenomeInfoDbData, GenomicRanges, limma, locfit, rjson, scater, shinydashboard, SingleCellExperiment, SummarizedExperiment, tximport, XVector, zlibbioc
Installing packages into ‘/usr/local/lib/R/site-library’
(as ‘lib’ is unspecified)
Error: (converted from warning) package ‘BiocSingular’ is not available (for R version 3.5.3)

I've then tried to install biocSingular. However, I get the following error:

In file included from /usr/local/lib/R/site-library/beachmat/include/beachmat/all_readers.h:4:0,
                 from /usr/local/lib/R/site-library/beachmat/include/beachmat/LIN_matrix.h:4,
                 from /usr/local/lib/R/site-library/beachmat/include/beachmat/numeric_matrix.h:4,
                 from compute_scale.cpp:2:
/usr/local/lib/R/site-library/beachmat/include/beachmat/beachmat.h:15:19: fatal error: H5Cpp.h: No such file or directory
 #include "H5Cpp.h"
                   ^
compilation terminated.
/usr/local/lib/R/etc/Makeconf:172: recipe for target 'compute_scale.o' failed
make: *** [compute_scale.o] Error 1
ERROR: compilation failed for package ‘BiocSingular’
* removing ‘/usr/local/lib/R/site-library/BiocSingular’
Error in i.p(...) : 
  (converted from warning) installation of package ‘/tmp/RtmpGJQkfa/file1977a4d39ec/BiocSingular_0.99.14.tar.gz’ had non-zero exit status

Does anyone know a way to solve this? Any help will be really appreciated.

Thanks in advance!

Davi

[LTLA]

Copy of LTLA/BiocSingular#4.