Remove "no_phi" from "quality assurance results" (#2227) #2213
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| name: Debian / Upgrade Test | |
| on: | |
| push: | |
| branches: | |
| - dev | |
| pull_request: | |
| branches: | |
| - dev | |
| jobs: | |
| testupgrade: | |
| name: Upgrade Test | |
| runs-on: ubuntu-latest | |
| container: ${{ matrix.container }} | |
| strategy: | |
| matrix: | |
| container: ['debian:11', 'debian:12'] | |
| steps: | |
| - name: Install dependencies | |
| run: | | |
| apt-get update --yes | |
| apt-get install --yes \ | |
| build-essential \ | |
| flake8 \ | |
| git \ | |
| libcap-dev \ | |
| libffi-dev \ | |
| libflac-dev \ | |
| libpq-dev \ | |
| libseccomp-dev \ | |
| python3-dev \ | |
| sudo \ | |
| virtualenv \ | |
| wget \ | |
| zip | |
| - name: Check out repository | |
| uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: Mark git repository as trusted | |
| run: | | |
| git config --global --add safe.directory $(pwd) | |
| - name: Install WFDB | |
| run: | | |
| wget https://github.com/bemoody/wfdb/archive/10.7.0.tar.gz \ | |
| -O wfdb.tar.gz | |
| tar -xf wfdb.tar.gz | |
| (cd wfdb-* && ./configure --without-netfiles) | |
| make -C wfdb-*/lib install | |
| make -C wfdb-*/data install | |
| ldconfig | |
| - name: Install lightwave | |
| run: | | |
| wget https://github.com/bemoody/lightwave/archive/0.72.tar.gz \ | |
| -O lightwave.tar.gz | |
| tar -xf lightwave.tar.gz | |
| (cd lightwave-* && make CGIDIR=/usr/local/bin sandboxed-server) | |
| - name: Create .env file | |
| run: | | |
| ln -sT .env.example .env | |
| - name: Test PhysioNet server setup and upgrade | |
| run: | | |
| ./test-upgrade.sh -v origin/production |