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@MacoskoLab

Macosko Lab

Nervous system biology through innovative genomics

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  1. slideseq-tools slideseq-tools Public

    Tools for analyzing Slide-seq data

    Python 31 8

  2. cerebellum-atlas-analysis cerebellum-atlas-analysis Public

    Code and scripts used in analysis of snRNAseq cerebellar cortex atlas

    HTML 9 3

  3. brain-atlas brain-atlas Public

    Scripts for analyzing brain atlas data

    Python 8 1

  4. PuckCaller PuckCaller Public

    Matlab package for image processing and base calling

    MATLAB 2 3

  5. lab-sc-gcp lab-sc-gcp Public

    Python package enabling easy set up of GCP projects for lab-wide interactive single cell analysis.

    Python 1

  6. pyro-util pyro-util Public

    Forked from jamestwebber/pyro-util

    Python

Repositories

Showing 10 of 11 repositories
  • Macosko-Pipelines Public
    MacoskoLab/Macosko-Pipelines’s past year of commit activity
    R 0 1 0 1 Updated Nov 2, 2024
  • WDLslidetags Public
    MacoskoLab/WDLslidetags’s past year of commit activity
    R 0 0 0 0 Updated May 22, 2024
  • brain-atlas Public

    Scripts for analyzing brain atlas data

    MacoskoLab/brain-atlas’s past year of commit activity
    Python 8 MIT 1 0 1 Updated Mar 26, 2024
  • slideseq-tools Public

    Tools for analyzing Slide-seq data

    MacoskoLab/slideseq-tools’s past year of commit activity
    Python 31 8 5 1 Updated Oct 30, 2023
  • vitessce Public Forked from vitessce/vitessce

    Vitessce is a visual integration tool for exploration of spatial single-cell experiments.

    MacoskoLab/vitessce’s past year of commit activity
    JavaScript 0 MIT 43 0 0 Updated Dec 16, 2021
  • cerebellum-atlas-analysis Public

    Code and scripts used in analysis of snRNAseq cerebellar cortex atlas

    MacoskoLab/cerebellum-atlas-analysis’s past year of commit activity
    HTML 9 3 1 0 Updated Oct 11, 2021
  • colormap Public Forked from bpostlethwaite/colormap

    output rgb or hex colormaps

    MacoskoLab/colormap’s past year of commit activity
    JavaScript 0 MIT 35 0 0 Updated Aug 10, 2021
  • pyro-util Public Forked from jamestwebber/pyro-util
    MacoskoLab/pyro-util’s past year of commit activity
    Python 0 MIT 1 0 0 Updated May 31, 2021
  • PuckCaller Public

    Matlab package for image processing and base calling

    MacoskoLab/PuckCaller’s past year of commit activity
    MATLAB 2 3 0 0 Updated Oct 7, 2020
  • lab-sc-gcp Public

    Python package enabling easy set up of GCP projects for lab-wide interactive single cell analysis.

    MacoskoLab/lab-sc-gcp’s past year of commit activity
    Python 1 0 0 0 Updated Jul 8, 2020
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