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Read version info from nf-core/demultiplex version file #23

Read version info from nf-core/demultiplex version file

Read version info from nf-core/demultiplex version file #23

Workflow file for this run

name: Run tests
on: [push, pull_request]
jobs:
run-tests:
runs-on: ubuntu-20.04
env:
NXF_VER: 21.04.1
NXF_ANSI_LOG: false
steps:
- name: Check out repository code
uses: actions/checkout@v2
- name: Cache singularity images
uses: actions/cache@v2
with:
path: work/singularity
key: singularity-${{ hashFiles('config/nextflow_config/singularity.config') }}
restore-keys: singularity-
- name: Install Singularity
uses: eWaterCycle/setup-singularity@v7
with:
singularity-version: 3.8.3
- name: Install Nextflow
env:
CAPSULE_LOG: none
run: |
curl -s https://get.nextflow.io | bash
sudo mv nextflow /usr/local/bin/
- name: Make Nextflow binary executable
run: chmod +x /usr/local/bin/nextflow
- name: Set up python
uses: actions/setup-python@v2
with:
python-version: 3.9
architecture: x64
- name: Install test requirements
run: pip install -r requirements-dev.txt
- name: Run tests
run: pytest tests
- name: Run Black code formatting check
run: black --check .