Sync with main to bring in new file layout #181
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…ate-2021-02-19 Dev gfdl main candidate 2021-02-19
Merge main to dev/gfdl
Created the new config_src directory tree structure, as agreed upon at https://github.com/NOAA-GFDL/MOM6/discussions/1286, to eventually accomodate the selection of different infrastructures. No .F90 files are changed but there are small changes to ac/configure.ac to accomodate the new structure while also allowing for the old target to use the old structure. All answers are bitwise identical, and all MOM6-examples and TC tests are passing.
Updated the MOM6/docs files and .gitlab-ci.yml to reflect the new config_src directory structure.
- Use a new branch of MRS in the gitlab pipelines
- The job within the gitlab pipeline gnu:ice-ocean-nolibs had a modified search path but a "," instead of a "/" led to al caps being compiled and thus failure.
This patch removes the AC_CHECK_FILE autoconf macro which assigns a default path to the MOM_memory.h file path. This path was defaulting back to the old directory, and was added to support the regression verification testing, but this is a regression problem with should be handled by the regression, not the autoconf configuration. This will produce a regression test fail, but it not a cause for concern.
Remove AC_CHECK_FILE for legacy MOM_memory.h
This patch removes two lines where the target build (used for regression testing) were using the active branch's configure.ac, which caused path mismatches. We now use our local autoconf configuration files. This patch also fixes a typo in the source code dependencies of the target repository. The AC_CHECK_FILE for the solo driver has also beed removed, for the same reason as the MOM_memory.h check. Some comments were also added or reformatted to undocumented flags.
Testing: Target uses local autoconf
Hallberg noaa gfdl fms2
FMS1 Framework integration
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Bring in changes from main introduced in NOAA-GFDL#1342
This PR needs to be run with changes from ESCOMP/MOM_interface#83
testing = aux_mom.cheyenne_{intel,gnu} b4b