More than single short Reads and Long reads

[faraz89]

Hi,
So i have 2 libraries of short reads and 4 files of long reads and i am meaning to use all. Is it possible i can use more than one file for both short reads and long reads arguments in the script? Something like this for example:

python HECIL.py -l LongRead1.fa -l LongRead2.fa -s ShortRead1.fq -s ShortRead2.fq -len 202 -o Out

Or do i need to merge the short reads libraries as well as long reads files before using this tool?

Faraz

[ochoudhu]

You would have to merge them since the current version of HECIL supports a single file for each read type.

[semrich]

Thanks Olivia

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On Nov 13, 2017, at 8:28 PM, Olivia Choudhury ***@***.***> wrote: You would have to merge them since the current version of HECIL supports a single file for each read type. — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#1 (comment)>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AEeXlT_Cim7x_nZLZx8CbNb827JLvZbXks5s2OzWgaJpZM4QcVe1>.