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Feature/update fv3gfs tag #7

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The final (I hope) update to fix the /contrib module issues in the global-workflow. This updates the gfs tag so that it checkout out the tag containing my fix of the /contrib issue.

Also includes one other minor update from EMC.

RussTreadon-NOAA and others added 10 commits June 10, 2020 14:36
output cloud ceiling height and instant total cloud fraction.
output instant cloud fraction at low/mid/high cloud layer.
correct grib2 names of time averaged cloud fraction fraction at low/mid/high cloud layer from "TCDC" into "LCDC, MCDC, HCDC".
output radar reflectivity at 1/4 km above ground and model layer 1/2.
output mixed layer CAPE/CIN.
Remove simulated GOES-12 brightness temperature from gfs product.
Add the bug fix of initializing DBZI from Ruiyu.
Removing obsolete nm variable entries
…post

Adapting wavepostsbs for running on Hera
…on type o short.

modified:   sorc/checkout.sh  updated to model tag GFS.v16.0.6 to fix contrib issue on HERA
@christopherwharrop-noaa christopherwharrop-noaa merged commit 58bc1e7 into feature/gfsv16b-cloud Jun 16, 2020
@christopherwharrop-noaa christopherwharrop-noaa deleted the feature/update-fv3gfs-tag branch June 16, 2020 14:07
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
Squashed commit of the following:

commit 0e0dc87
Merge: b133700 95a6343
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Thu Mar 26 10:54:44 2020 -0400

    Merge pull request NOAA-GSL#42 from NOAA-EMC/hotfix/viewer

    Issue NOAA-GSL#41 - Update PRODUTIL paths for WCOSS in viewer

commit 95a6343
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Thu Mar 26 14:43:44 2020 +0000

    Issue NOAA-GSL#41 - Update PRODUTIL paths for WCOSS in viewer

commit b133700
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Thu Mar 26 13:01:38 2020 +0000

    Issue NOAA-GSL#21 - correct syntax for machine if-blocks in setup_expt scripts

commit f4ee509
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Wed Mar 25 20:52:49 2020 +0000

    Issue NOAA-GSL#21 - remove unneeded logic from partition check

commit 4acc80f
Merge: accb6f4 fb1c79f
Author: Hang-Lei-NOAA <44901908+Hang-Lei-NOAA@users.noreply.github.com>
Date:   Wed Mar 25 15:22:51 2020 -0400

    Merge pull request NOAA-GSL#40 from NOAA-EMC/port2wcoss3p5

    Issue NOAA-GSL#21 - Add support for WCOSS phase 3.5

commit fb1c79f
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Wed Mar 25 16:06:54 2020 +0000

    Issue NOAA-GSL#21 - updated WCOSS phase 3.5 queues

commit 08a5354
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Wed Mar 25 14:58:14 2020 +0000

    Issue NOAA-GSL#21 - add phase 3.5 support

    - add partition option to setup scripts
    - remove machine if-blocks from config.base and add variable population to setup_expt*py scripts
    - add phase 3.5 ppn value to WCOSS_DELL_P3 env and config.resources files

commit accb6f4
Merge: 057b2a8 8b51b56
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Mon Mar 23 14:01:30 2020 -0400

    Merge pull request NOAA-GSL#39 from NOAA-EMC/feature/verif-tag

    Issue NOAA-GSL#38 - update EMC_verif-global pointer from VLab to GitHub

commit 8b51b56
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Mon Mar 23 17:40:18 2020 +0000

    Issue NOAA-GSL#38 - update EMC_verif-global pointer from VLab to GitHub

commit 057b2a8
Merge: 0377d20 622167d
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Wed Mar 11 12:00:58 2020 -0400

    Merge pull request NOAA-GSL#29 from NOAA-EMC/feature/manage_externals

    Issue NOAA-GSL#3 - Introduce manage_externals as replacement for checkout.sh

commit 622167d
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Fri Mar 6 18:20:31 2020 +0000

    Issue NOAA-GSL#3 - added explicit config flag example for checkout_externals in README and blurb about this replacing checkout.sh

commit e83b90d
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Fri Mar 6 17:00:15 2020 +0000

    Issue NOAA-GSL#3 - remove prod_util and grib_util sections from build_all.sh, removed elsewhere already

commit 8699b46
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Fri Mar 6 16:30:54 2020 +0000

    Issue NOAA-GSL#3 - updated README with new manic version

commit e602cd3
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Fri Mar 6 16:27:57 2020 +0000

    Issue NOAA-GSL#3 - updated link_fv3gfs.sh to adjust wafs links

commit 830c73f
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Fri Mar 6 15:21:45 2020 +0000

    Issue NOAA-GSL#3 - update EMC_verif-global tag in Externals.cfg after sync with develop

commit 40084e6
Merge: f662fff 0377d20
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Fri Mar 6 15:18:52 2020 +0000

    Issue NOAA-GSL#3 - Merge branch 'develop' into feature/manage_externals

commit 0377d20
Merge: 1b359db 2552467
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Thu Mar 5 08:43:16 2020 -0500

    Merge pull request NOAA-GSL#28 from NOAA-EMC/feature/metplus2

    Issue NOAA-GSL#8 - add switch for MET+ jobs

commit 2552467
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Thu Mar 5 13:31:02 2020 +0000

    Issue NOAA-GSL#8 - add switch for MET+ jobs

commit 1b359db
Merge: 0359d34 31bb7d3
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Wed Mar 4 10:19:36 2020 -0500

    Merge pull request NOAA-GSL#26 from NOAA-EMC/feature/metplus

    Feature/metplus - refactored MET+ jobs to resolve timing issues

commit 31bb7d3
Merge: eb73e52 0359d34
Author: Mallory Row <mallory.row@noaa.gov>
Date:   Wed Feb 19 15:24:42 2020 +0000

    Merge branch 'develop' into feature/metplus

commit f662fff
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Fri Feb 14 15:57:05 2020 +0000

    Issue NOAA-GSL#3 - Updated README with new manic tag v1.1.7

commit e3196a8
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Thu Feb 13 15:59:06 2020 -0500

    Update README.md

commit e46b175
Merge: 4bd0e20 0359d34
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Thu Feb 13 20:38:04 2020 +0000

    Issue NOAA-GSL#3 - sync merge with develop branch

commit 0359d34
Merge: 1d9a1f0 bd00cb9
Author: Hang-Lei-NOAA <44901908+Hang-Lei-NOAA@users.noreply.github.com>
Date:   Thu Feb 13 09:53:59 2020 -0500

    Merge pull request NOAA-GSL#19 from NOAA-EMC/feature/remove_theia

    Feature/remove theia

commit eb73e52
Author: Mallory Row <mallory.row@noaa.gov>
Date:   Fri Feb 7 14:04:37 2020 +0000

    Update EMC_verif-global checkout to verif_global_v1.5.0

commit bd00cb9
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Fri Feb 7 13:41:05 2020 +0000

    Issue NOAA-GSL#4 - bug fix in getic.sh for v15

commit 1c85197
Merge: 67dae40 1d9a1f0
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Fri Feb 7 13:27:18 2020 +0000

    Issue # 4 - Sync merge branch 'develop' into feature/remove_theia

commit 1d9a1f0
Merge: 3ed9267 bdbecaa
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Fri Feb 7 08:11:21 2020 -0500

    Merge pull request NOAA-GSL#18 from lgannoaa/exception_handling

    Exception handling

commit 4bd0e20
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Thu Feb 6 11:55:31 2020 -0500

    Update README.md

commit d9ea1ac
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Thu Feb 6 16:03:11 2020 +0000

    Issue NOAA-GSL#3 - reduce hashes down to minimum 8 characters

commit bdbecaa
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Wed Jan 29 15:15:52 2020 +0000

    Display exception handling message for individual package with location of the log file

commit b64fd5f
Merge: cf00863 3ed9267
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Jan 28 15:24:37 2020 +0000

    Merge branch 'develop' into feature/manage_externals

commit cf00863
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Jan 28 15:23:14 2020 +0000

    Issue NOAA-GSL#3 - remove copy of manage_externals under util and add README.md file

commit c12e879
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Mon Jan 27 19:38:19 2020 +0000

    Implement exception handling in build_all script

commit bfc7bb0
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Mon Jan 27 19:06:17 2020 +0000

    Issue NOAA-GSL#3 - initial add of manage_externals and needed Externals.cfg. Also added .gitignore file and removed scripts/files associated with no-longer-used prod_util and grid_util builds.

commit 4d5713d
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Fri Jan 24 15:51:28 2020 +0000

    Testing github commit

commit 786806f
Author: Mallory Row <mallory.row@noaa.gov>
Date:   Fri Jan 24 15:04:16 2020 +0000

    Missed file format updates in a few places in config.metp

commit d0a3b53
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Fri Jan 24 14:30:29 2020 +0000

    init commit for exception handling branch

commit c11dfef
Author: Mallory Row <mallory.row@noaa.gov>
Date:   Fri Jan 24 14:07:29 2020 +0000

    Update EMC_verif-global tag to verif_global_v1.4.1

commit 0ea809c
Author: Mallory Row <mallory.row@noaa.gov>
Date:   Thu Jan 23 13:29:56 2020 +0000

    Update file format variable in config.metp of online archive files

commit c0d7179
Author: Mallory Row <mallory.row@noaa.gov>
Date:   Tue Jan 21 16:37:16 2020 +0000

    Add updated env machine files for gfsmetp

commit 82e6907
Author: Mallory Row <mallory.row@noaa.gov>
Date:   Tue Jan 21 16:29:23 2020 +0000

    Update config.resources for gfsmetp

commit 72e8adf
Author: Mallory Row <mallory.row@noaa.gov>
Date:   Tue Jan 21 16:19:31 2020 +0000

    Update EMC_verif-global tag checkout to 1.4.0

commit 6872f79
Author: Mallory Row <mallory.row@noaa.gov>
Date:   Tue Jan 21 16:14:25 2020 +0000

    Add rocoto METplus job script

commit 9c94156
Author: Mallory Row <mallory.row@noaa.gov>
Date:   Tue Jan 21 16:09:13 2020 +0000

    Changes to setup_workflow.py for gfsmetp metatask

commit 3ed9267
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Jan 14 19:32:36 2020 +0000

    Issue NOAA-GSL#10 - mid-year update to bufr station list (develop)

commit 1915aa9
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Fri Jan 10 18:36:32 2020 +0000

    Issue NOAA-GSL#8 - pulled in config.metp and modifications to two setup scripts

commit 67dae40
Merge: f78eb1b 091f4ba
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Wed Jan 8 20:15:45 2020 +0000

    Merge branch 'develop' into feature/remove_theia

commit f78eb1b
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Wed Jan 8 20:13:08 2020 +0000

    Issue NOAA-GSL#4 - removed references to Theia and Theia scripts

commit 091f4ba
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Wed Jan 8 19:37:45 2020 +0000

    Issue NOAA-GSL#7 - missed update to gdas transfer file from GFSv15.2.5 updates

commit 3fd4bcf
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Dec 17 19:12:28 2019 +0000

    GitHub Issue NOAA-GSL#2 - GFSv15.2.6 obsproc version update, earc bug fix, and tracker path update

commit 5307952
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Wed Dec 11 20:47:44 2019 +0000

    HOTFIX - VLab Issue #72346 - fix to rocoto_viewer on Hera
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