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Update location of GSI repository in Externals.cfg. #1

Merged
merged 1 commit into from
Jun 10, 2020
Merged

Update location of GSI repository in Externals.cfg. #1

merged 1 commit into from
Jun 10, 2020

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christopherwharrop-noaa
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Update tags in Externals.cfg to be consistent with sorc/checkout.sh

@christopherwharrop-noaa
Update location of GSI repository in Externals.cfg.
2debb54 
Update tags in Externals.cfg to be consistent with sorc/checkout.sh
@christopherwharrop-noaa
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@danielabdi-noaa / @markgovett - I have specified both of you as reviewers for this PR. You should have gotten an email from GitHub notifying you of that. I am writing this comment in the PR interface using the @ symbol to directly address you for correspondence regarding this PR. You should also get an email notifying you of this comment. You can respond in Github (recommended) or via email (not recommended). I need you to review this PR and either approve it, or request changes, or reject it. I can merge after 1 approval.

danielabdi-noaa
danielabdi-noaa approved these changes Jun 10, 2020
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Testing approval

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@danielabdi-noaa - Thank you for your approval. I can now merge. Note that "Squash and Merge" is the preferred merge method. Also note that a "Remove Branch" button will appear after you click the green "Merge pull request" button to remove the branch you just merged. ALWAYS remove the branch you just merged to keep the repository clean. Please go ahead and try merging this.

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@danielabdi-noaa - Also make sure you actually look at the PR and give it a thorough review to make sure it looks ok. Also, since we don't have continuous integration set up, you should normally check out the branch the PR wants to merge and test it to make sure it works before approving. Never just blindly approve a PR; look at the changes and be critical of them.

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Chris, I am not authorized to merge pull request, the button is disable for me.

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@danielabdi-noaa - Try refreshing the page and see if it's available now.

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@danielabdi-noaa - BTW, if you want to address me directly in a comment, you can type "@" and it will bring up a list of users and you can select mine, and I'll get notified directly.

@danielabdi-noaa danielabdi-noaa merged commit d60039d into feature/gfsv16b-cloud Jun 10, 2020
@danielabdi-noaa danielabdi-noaa deleted the feature/update-externals branch June 10, 2020 14:28
christopherwharrop-noaa pushed a commit that referenced this pull request Jun 11, 2020
@RussTreadon-NOAA
Issue #1: update parm/config/config.base.emc.dyn to be consistent wit…
4405a2c 
…h GFS v16 real-time parallel config.base
christopherwharrop-noaa pushed a commit that referenced this pull request Jun 11, 2020
@KateFriedman-NOAA
Issue #1 - Hotfix to update anaconda module contrib path on Hera
10ce1d4
danielabdi-noaa pushed a commit that referenced this pull request Jun 11, 2020
@christopherwharrop-noaa @RussTreadon-NOAA @KateFriedman-NOAA
Feature/gfsv16b updates from emc (#4)
e96b710 
* Issue #1:  update parm/config/config.base.emc.dyn to be consistent with GFS v16 real-time parallel config.base

* Issue #1 - Hotfix to update anaconda module contrib path on Hera

Co-authored-by: russ.treadon <Russ.Treadon@noaa.gov>
Co-authored-by: Kate.Friedman <Kate.Friedman@noaa.gov>
christopherwharrop-noaa added a commit that referenced this pull request Jun 15, 2020
@christopherwharrop-noaa @RussTreadon-NOAA
@KateFriedman-NOAA @yangfanglin
Feature/gfsv16b update from emc (#5)
f0301a5 
* Issue #1:  update parm/config/config.base.emc.dyn to be consistent with GFS v16 real-time parallel config.base

* Issue #1 - Hotfix to update anaconda module contrib path on Hera

* modified:   checkout.sh to check out upp_gfsv16_relaese.v1.0.9

output cloud ceiling height and instant total cloud fraction.
output instant cloud fraction at low/mid/high cloud layer.
correct grib2 names of time averaged cloud fraction fraction at low/mid/high cloud layer from "TCDC" into "LCDC, MCDC, HCDC".
output radar reflectivity at 1/4 km above ground and model layer 1/2.
output mixed layer CAPE/CIN.
Remove simulated GOES-12 brightness temperature from gfs product.
Add the bug fix of initializing DBZI from Ruiyu.

Co-authored-by: russ.treadon <Russ.Treadon@noaa.gov>
Co-authored-by: Kate.Friedman <Kate.Friedman@noaa.gov>
Co-authored-by: fanglin.yang <fanglin.yang@noaa.gov>
christopherwharrop-noaa pushed a commit that referenced this pull request Jun 15, 2020
@KateFriedman-NOAA
Issue #1 - update Externals.cfg to match updates to checkout.sh
d878269
christopherwharrop-noaa added a commit that referenced this pull request Jun 15, 2020
@christopherwharrop-noaa @RussTreadon-NOAA
@ajhenrique @KateFriedman-NOAA @yangfanglin
Feature/updates from emc (#6)
1b7242a 
* Issue #1:  update parm/config/config.base.emc.dyn to be consistent with GFS v16 real-time parallel config.base

* Adapting wavepostsbs for running on Hera

* Issue #1 - Hotfix to update anaconda module contrib path on Hera

* modified:   checkout.sh to check out upp_gfsv16_relaese.v1.0.9

output cloud ceiling height and instant total cloud fraction.
output instant cloud fraction at low/mid/high cloud layer.
correct grib2 names of time averaged cloud fraction fraction at low/mid/high cloud layer from "TCDC" into "LCDC, MCDC, HCDC".
output radar reflectivity at 1/4 km above ground and model layer 1/2.
output mixed layer CAPE/CIN.
Remove simulated GOES-12 brightness temperature from gfs product.
Add the bug fix of initializing DBZI from Ruiyu.

* Update exwave_post_sbs.sh

Removing obsolete nm variable entries

* Issue #1 - update Externals.cfg to match updates to checkout.sh

Co-authored-by: russ.treadon <Russ.Treadon@noaa.gov>
Co-authored-by: henrique.alves <Henrique.Alves@noaa.gov>
Co-authored-by: Kate.Friedman <Kate.Friedman@noaa.gov>
Co-authored-by: fanglin.yang <fanglin.yang@noaa.gov>
Co-authored-by: Jose-Henrique Alves <47567389+ajhenrique@users.noreply.github.com>
christopherwharrop-noaa pushed a commit that referenced this pull request Jun 16, 2020
@KateFriedman-NOAA
Issue #1 - sync Externals.cfg with checkout.sh update for FV3 GFSv16.…
dfc76f0 
…0.6 tag
christopherwharrop-noaa added a commit that referenced this pull request Jun 16, 2020
@christopherwharrop-noaa @RussTreadon-NOAA
@ajhenrique @KateFriedman-NOAA @yangfanglin
Feature/update fv3gfs tag (#7)
58bc1e7 
* Issue #1:  update parm/config/config.base.emc.dyn to be consistent with GFS v16 real-time parallel config.base

* Adapting wavepostsbs for running on Hera

* Issue #1 - Hotfix to update anaconda module contrib path on Hera

* modified:   checkout.sh to check out upp_gfsv16_relaese.v1.0.9

output cloud ceiling height and instant total cloud fraction.
output instant cloud fraction at low/mid/high cloud layer.
correct grib2 names of time averaged cloud fraction fraction at low/mid/high cloud layer from "TCDC" into "LCDC, MCDC, HCDC".
output radar reflectivity at 1/4 km above ground and model layer 1/2.
output mixed layer CAPE/CIN.
Remove simulated GOES-12 brightness temperature from gfs product.
Add the bug fix of initializing DBZI from Ruiyu.

* Update exwave_post_sbs.sh

Removing obsolete nm variable entries

* Issue #1 - update Externals.cfg to match updates to checkout.sh

* modified:   scripts/run_gfsmos_master.sh.dell to set default verification type o short.
modified:   sorc/checkout.sh  updated to model tag GFS.v16.0.6 to fix contrib issue on HERA

* Issue #1 - sync Externals.cfg with checkout.sh update for FV3 GFSv16.0.6 tag

Co-authored-by: russ.treadon <Russ.Treadon@noaa.gov>
Co-authored-by: henrique.alves <Henrique.Alves@noaa.gov>
Co-authored-by: Kate.Friedman <Kate.Friedman@noaa.gov>
Co-authored-by: fanglin.yang <fanglin.yang@noaa.gov>
Co-authored-by: Jose-Henrique Alves <47567389+ajhenrique@users.noreply.github.com>
christopherwharrop-noaa pushed a commit that referenced this pull request Jun 23, 2020
@RussTreadon-NOAA
Issue #1: merge branch 'feature/chgresfcst' at 965ff42 into feature/g…
ff8cd28 
…fsv16b
christopherwharrop-noaa pushed a commit that referenced this pull request Jul 9, 2020
@RussTreadon-NOAA
Issue #1: HPSS archive and MOS script changes
b8192e5 
 * replace enkf member atmi*nc with ratmi*nc in HPSS enkf tarballs

 * add ensemble resolution analysis to HPSS gdas tarball

 * allow variable range to be externally set in run_gfsmos_master scripts
christopherwharrop-noaa pushed a commit that referenced this pull request Jul 9, 2020
@RussTreadon-NOAA
Issue #1: update sorc/checkout.sh to checkout verif_global_v1.9.0
22ad770
christopherwharrop-noaa pushed a commit that referenced this pull request Jul 9, 2020
@RussTreadon-NOAA
Issue #1: set g2o1_obtype_conus_sfc in config.metp to "ONLYSF ADPUPA"
6e73de0
danielabdi-noaa pushed a commit that referenced this pull request Jul 9, 2020
@christopherwharrop-noaa @CoryMartin-NOAA
@RussTreadon-NOAA @ajhenrique @KateFriedman-NOAA @yangfanglin @JessicaMeixner-NOAA
Merge updates from EMC. (#8)
cd757bc 
* First draft to add chgresfcst to rocoto workflow

* Issue #1:  update parm/config/config.base.emc.dyn to be consistent with GFS v16 real-time parallel config.base

* Commit changes from debugging addition of chgresfcst on hera

* add checkout.sh to test on Dell

* Adapting wavepostsbs for running on Hera

* Issue #1 - Hotfix to update anaconda module contrib path on Hera

* modified:   checkout.sh to check out upp_gfsv16_relaese.v1.0.9

output cloud ceiling height and instant total cloud fraction.
output instant cloud fraction at low/mid/high cloud layer.
correct grib2 names of time averaged cloud fraction fraction at low/mid/high cloud layer from "TCDC" into "LCDC, MCDC, HCDC".
output radar reflectivity at 1/4 km above ground and model layer 1/2.
output mixed layer CAPE/CIN.
Remove simulated GOES-12 brightness temperature from gfs product.
Add the bug fix of initializing DBZI from Ruiyu.

* Update exwave_post_sbs.sh

Removing obsolete nm variable entries

* Issue #1 - update Externals.cfg to match updates to checkout.sh

* Issue NOAA-EMC#85:  add cfp option to chgresfcst; enable threads with chgresfcst

* modified:   scripts/run_gfsmos_master.sh.dell to set default verification type o short.
modified:   sorc/checkout.sh  updated to model tag GFS.v16.0.6 to fix contrib issue on HERA

* Issue #1 - sync Externals.cfg with checkout.sh update for FV3 GFSv16.0.6 tag

* update  checkout.sh to switch back to post version upp_gfsv16_release.v1.0.8.   1.0.9 still has issues.

* modified:   run_gfsmos_master.sh.dell to still set range=both as the default for running the real-time parallel

* Issue NOAA-EMC#85:  (1) rename "chgresfcst" as "echgres", (2) add chgres variables to env

* Issue NOAA-EMC#85:  update DA checkout to point at release/gfsda.v16.0.0

* Update config.resources

Generalize setting of echgres threads to be maximum permitted on given platform instead of explicitly setting echgres threads on every platform.

* Update version of upp in Externals.cfg to be consistent with sorc/checkout.sh

* modified:   Externals.cfg and  sorc/checkout.sh to check out model tag GFS.v16.0.7
   and UPP tag upp_gfsv16_release.v1.0.9.  Changes include:

1) Inline POST Issues NOAA-EMC#136 and $142
   * Update ceiling height calculation for global FV3.
   * add low,middle,high instantaneous cloud fraction
   * add radar reflectivity at model layers 1 and 2 , and radar reflectivities at 1 and 4-km height.
   * fix a bug in initializing DBZI
   * output mixed layer CAPE/CIN
   * remove simulated GOES-12 brightness temperature.
   * change the names of time averaged low/mid/high cloud fractions in grib2 files
     from "TCDC" to "LCDC/MCDC/HCDC", respectively.

2) Model Issue NOAA-EMC#152
   * update in-line post control files
   * upgrade post library to 8.0.9 for hera and wcoss_dell_p3

* Merge updates from EMC.

* Update README.md

Remove use/mention of manage_externals until checkout.sh is retired.

* fix for exiting properly with error for wave prep/init scripts

* Issue #1:  HPSS archive and MOS script changes

 * replace enkf member atmi*nc with ratmi*nc in HPSS enkf tarballs

 * add ensemble resolution analysis to HPSS gdas tarball

 * allow variable range to be externally set in run_gfsmos_master scripts

* modified:   config.vrfy to point a different syndat directory on Hera
       export COMROOTp1="/scratch1/NCEPDEV/global/glopara/com"
       export COMINsyn=${COMINsyn:-${COMROOTp1}/gfs/prod/syndat}

* corrected a typo in  hpssarch_gen.sh
-     echo  "${dirname}${head}atma000.ensres${SUFFIX}  " >>gdas.txt
+     echo  "${dirname}${head}atma009.ensres${SUFFIX}  " >>gdas.txt

* modified:   config.vrfy to add
    elif [ $machine = "HERA" ] ; then
        export RUNGFSMOSSH="$HOMEgfs/scripts/run_gfsmos_master.sh.hera"

* modified:   jobs/JGLOBAL_FORECAST   parm/config/config.wave   scripts/exglobal_fcst_nemsfv3gfs.sh
    add WW3 break-point restart capability and clean up forecast script.

* further updated exglobal_fcst_nemsfv3gfs.sh to use restart_wave directory for gdas cycle  as well

* Issue #1:  update sorc/checkout.sh to checkout verif_global_v1.9.0

* Issue #1:  set g2o1_obtype_conus_sfc in config.metp to "ONLYSF ADPUPA"

* modified:   checkout.sh to checkout model tag GFS.v16.0.9

 1.   WW3 update: write all restart files in a sub-directory restart_wave
 2.   Port production/GFS.v16 to Orion (NOAA-EMC#129)
    * Update FV3 submodule
    * Update NEMS submodule
    * Add 'ulimit -s unlimited' to Orion job card template
    * Update NEMS submodule to point to fix_moduleinit branch in 'junwang-noaa/NEMS'
    * Update modulefiles/orion.intel/fv3
    * Update regression test configuration on Orion (for gfs_v16)
    * Update NEMS submodule (change /apps/lmod/init path after Orion maintenance)
    * Update NEMS submodule (point to NOAA-EMC/NEMS)

Co-authored-by: CoryMartin-NOAA <cory.r.martin@noaa.gov>
Co-authored-by: russ.treadon <Russ.Treadon@noaa.gov>
Co-authored-by: henrique.alves <Henrique.Alves@noaa.gov>
Co-authored-by: Kate.Friedman <Kate.Friedman@noaa.gov>
Co-authored-by: fanglin.yang <fanglin.yang@noaa.gov>
Co-authored-by: Jose-Henrique Alves <47567389+ajhenrique@users.noreply.github.com>
Co-authored-by: RussTreadon-NOAA <26926959+RussTreadon-NOAA@users.noreply.github.com>
Co-authored-by: JessicaMeixner-NOAA <Jessica.Meixner@noaa.gov>
christopherwharrop-noaa added a commit that referenced this pull request Jul 13, 2020
@danielabdi-noaa @RussTreadon-NOAA
@jqs-noaa @christopherwharrop-noaa
Feature/linux target (#3)
8e40bd6 
* Issue #1:  update parm/config/config.base.emc.dyn to be consistent with GFS v16 real-time parallel config.base

* Add makefiles for a linux target.

* Make necessary source code changes for linux target.

* Merge linux setup files for gnu/intel.

* Modify GEMPAK path.

* Add missing module files.

* Set netcdf include directory env. variable.

* Added contents of cloud work to repository.

* Temporary fix for intel on jenkins by turning of openmp.

* Revert back to copying global-workflow from host.

* Fixes of ufs_utils with intel.

* remove temp image if it exists before building

* - Add pipefail to shell scripts to exit if a piped command fails
- Add MAKEFLAGS to set parallel job builds for build_esmf.sh and
  build_netcd.sh

* added test to verify build of fv3gfs

* Copy fv3gfs.fd from host.

* Checkout gfs automatically if not present.

* Remove bug in fv3nc2nemsio makefile.

* Update GSI patch.

* Clone global-workflow from container using secrets.

* Bug fix with GSI cloning on jenkins.

* Fix GSI for intel patch.

* Update FV3 patch.

Co-authored-by: russ.treadon <Russ.Treadon@noaa.gov>
Co-authored-by: Jebb Q. Stewart <jebb.q.stewart@noaa.gov>
Co-authored-by: Christopher Harrop <Christopher.W.Harrop@noaa.gov>
christopherwharrop-noaa pushed a commit that referenced this pull request Aug 20, 2020
@KateFriedman-NOAA
Issue #1 - add mod_icec.sh to UPP ush script symlinking in link_fv3gf…
37e0f57 
…s.sh
christopherwharrop-noaa pushed a commit that referenced this pull request Aug 20, 2020
@RussTreadon-NOAA
Issue #1: add enkf member sfcf006.nc to enkf tarballs
145f810
christopherwharrop-noaa pushed a commit that referenced this pull request Aug 20, 2020
@RussTreadon-NOAA
Issue #1: refactor CFP in DA sections of HERA.env and WCOSS_DELL_P3.env
d175130
christopherwharrop-noaa pushed a commit that referenced this pull request Aug 20, 2020
@KateFriedman-NOAA
Issue #1 - update to prod_util version (1.1.3 -> 1.1.4) on WCOSS-Dell…
9b923ac 
… for post P1/P2 removal
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
Pull in config changes from NCO v16.0.7 install
3786256 
- add line to config.fcst to allow running gdas and gfs with different threading
- add nth_fv3_gfs to config.fv3 to support different threading for gfs
- changes to post settings in config.resources to make post use all tasks on a node
and speed up post jobs

Refs: NOAA-GSL#1,NOAA-EMC#238
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
Remove KEEPDATA from config.base.nco.static
264e51f 
- NCO requested that KEEPDATA be removed from config.base and config.fcst since
KEEPDATA gets set at the ecflow level and shouldn't be changed by the configs lower down.
- Already commented out in config.fcst in prior commit.
- Removed KEEPDATA from config.base.nco.static since it becomes config.base
in prod mode with ecflow.
- Retaining KEEPDATA in config.base.emc.dyn since that only becomes config.base
in dev mode (rocoto doesn't set KEEPDATA).

Refs: NOAA-GSL#1,NOAA-EMC#238
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
Update EMC_gfs_wafs tag to gfs_wafs.v6.0.19
80e4a39 
- new tag includes changes made locally in NCO nwpara/gfsv16.0.7 install

Refs: NOAA-GSL#1,NOAA-EMC#238
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
Add missing symlinks for WAFS source code folders
25152a1 
- added symlinks in link_fv3gfs.sh for wafs_blending_0p25.fd and wafs_grib2_0p25.fd

Refs: NOAA-GSL#1,NOAA-EMC#238
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
Merge remote-tracking branch 'origin/release/gfsv16.0.0' into feature…
428e1ba 
…/issue238

* origin/release/gfsv16.0.0:
  Add missing symlinks for WAFS source code folders
  Update EMC_gfs_wafs tag to gfs_wafs.v6.0.19

Refs: NOAA-GSL#1,NOAA-EMC#238
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
ecflow forecast job resource updates from NCO v16.0.7 install
9ccb24c 
Refs: NOAA-GSL#1,NOAA-EMC#238
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
Add config.resources.nco.static
9027452 
- added parm/config/config.resources.nco.static; contains resources for operations
- added copy of config.resources.nco.static in link_fv3gfs.sh when nco mode

Refs: NOAA-GSL#1,NOAA-EMC#238
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@AnningCheng-NOAA
Merge remote-tracking branch 'upstream/develop' into merra2
ac76613 
* upstream/develop:
  remove flags that were not present in Makefiles
  update jasper to 2.x.25. remove compiler flag in fv3nc2nemsio
  Update EMC_verif-global tag to verif_global_v1.13.4
  another use of _d where an _4 is needed
  Adjust how target is set for build_workflow_utils
  Add workflow_utils to build_all and link scripts
  copy/paste error from enkf_chgres_recenter.fd to enkf_chgres_recenter_nc.fd.  When going from nemsio to netcdf, the linking of ip, sp and w3nco changed from _d to _4.
  update .gitignore to exclude build and install directories as well as compiled files. bugfix in build_workflow_utils.sh hack. nceplibs-ncio now creates the module ncio and not fv3gfs_ncio.
  add cmake build capability for workflow utilities
  Update Fit2Obs tag to newm.1.3 for bugfix
  Update Fit2Obs tag to newm.1.3 for bugfix
  Update EMC_verif-global tag for Hera bug
  Pull in nwpara/gfsv16.0.6 updates for parse-storm-type.pl
  HOTFIX: Update EMC_verif-global tag for Hera bug
  Issue NOAA-GSL#1 and issue NOAA-EMC#238 - update Externals.cfg to match checkout.sh updates for v16.0.6
  move errchk definition from script to job for wave prdgen and gempak
  adding definition of errchk which was undefined in these scripts
  Issue NOAA-EMC#179 and issue NOAA-EMC#243 - update Fit2Obs to newm.1.2 tag and correct COMROOT path for Hera
  HOTFIX: Issue NOAA-EMC#241 - update EMC_verif-global tag to remove use of /tmp space
  Issue NOAA-GSL#1 and issue NOAA-EMC#233 - update GLDAS tag to gldas_gfsv16_release.v1.13.0
  Issue NOAA-GSL#1 and issue NOAA-EMC#241 - update EMC_verif-global tag
  Issue NOAA-GSL#1 and issue NOAA-EMC#238 - remove ak_10m grid from config.wave and update checkout.sh tags for ufs-weather-model and EMC_gfs_wafs
  Issue NOAA-EMC#179 - update to config.vrfy for Fit2Obs tag which supports Orion
  Issue NOAA-GSL#1 and issue NOAA-EMC#226 - update UPP tag to upp_gfsv16_release.v1.1.3 in Externals.cfg
  Issue NOAA-GSL#1 and issue NOAA-EMC#226 - update UPP tag to upp_gfsv16_release.v1.1.3
  Issue NOAA-EMC#233 - remove unnecessary extra space in tag line for gldas
  Issue NOAA-EMC#233 - update GLDAS tag to gldas_gfsv16_release.v1.13.0
  Issue NOAA-GSL#1 and issue NOAA-EMC#226 - update exgfs_atmos_grib2_special_npoess.sh for dbn_alert
  modified:   exglobal_forecast.sh The breakpoint restart only works for the first restart from a breakpoint. Restart files written in RERUN_RESTRAT after the first restart has a 3-hour time shift for DO_IAU=YES cases. Forecasts starting from the 2nd breakpoint and beyond will fail becasue of incorrect initial conditins.  This commit fixes this bug.
  issue NOAA-EMC#227 reducing output bufr files to 64 levels per NCO request
  issue NOAA-EMC#227 reducing output bufr files to 64 levels per NCO request
  Issue NOAA-GSL#1:  update ecflow to be consistent with NCO's gfs.v16.0.4 and            update checkout to bring in new UPP tag (see issue NOAA-EMC#226)
  Upaded ush script scale_dec.sh
  Updated scripts gfs_v16.0
  Issue NOAA-GSL#1 and issue NOAA-EMC#220 - set C192/C96/C48 npe_eobs back to dev values for develop
  Issue NOAA-GSL#1 - add grib_util module load to several analysis ecflow scripts
  Issue NOAA-EMC#189 - update ufs-weather-model hash
  Issue NOAA-EMC#201 - workaround for failing post000 job before hpc-stack solution
  Issue NOAA-GSL#1 - update WAFS tag to gfs_wafs.v6.0.17 for dbn_alert change
  Issue NOAA-GSL#1 - correct gridded wave parm files for v16.0.3
  Issue NOAA-GSL#1 - changes from NCO for GFSv16.0.3
  Issue NOAA-GSL#1 - update Externals.cfg with final tags for GFSv16.0.2
  Fixes for issue NOAA-EMC#202 (FINDDATE) and issue NOAA-EMC#208 (postsnd.sh permissions)
  Issue NOAA-GSL#1 - correct permissions on jobs/rocoto/postsnd.sh
  Issue NOAA-GSL#1 - update gempak version to 7.3.3 in the ecflow gfs.ver file
  Issue NOAA-GSL#1 - update gempak and dumpjb versions to 7.3.3 and 5.1.0 respectively
  Script alert updates from NCO for wave downstream
  Add override for COMIN_WAV_RTOFS in emc mode for waveprep job
  Issue NOAA-EMC#197:  place CDATE specific sections of config.anal and config.prep inside RUN_ENVIR=emc blocks.              These sections are use for retrospective parallels and therefore do not need to be              executed in operations (NCO).
  modified:   JGLOBAL_FORECAST
  modified:   JGLOBAL_FORECAST to make it work for both emc and nco running environments.
  modified:   JGLOBAL_FORECAST A test showed that jobid is not defined in JGLOBAL_FORECAST running in the Rocoto environment. jobid is defined in ./env files. Defining DATA without sourcing ./env/$nachine.env caused the script to fail.  Move the definitin of DATA after sourcing env parameters
  modified:   checkout.sh to use WAFS tag gfs_wafs.v6.0.16
  modified:   checkout.sh to update UPP to  upp_gfsv16_release.v1.1.1, a minor syntax bug fix
  modified:   link_fv3gfs.sh to 1) use hard copies of external fix fields and executable for NCO installation 2) use soft links for all other files and directories for both NCO and EMC installations
  Compared local files in NCO implementation directory with release/gfs.v16.0.0 branch, changes made by NCO(Jen Yang) in the following files are either accepted or rejected.
  create a new branch release/gfsv16.0.0.nco to merge changes made by NCO in /gpfs/dell1/nco/ops/nwpara/gfs-v16/gfs.v16.0.1 back to EMC's repository
  update for the wave parm so that the wave model will look for the correct restart for when gfs is not run every cycle
  updates for checking if RTOFS files exist and only processing RTOFS files for needed fhr
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
Updated transfer parm files for gdas, enkf, and gfs dissemination
39bab45 
Refs: NOAA-GSL#1,NOAA-EMC#238
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
Component tag updates for nwprod/gfsv16.0.7
41c19e9 
- Final nwprod implementation component tag versions set in Externals.cfg and checkout.sh
- GLDAS: roll back to gldas_gfsv16_release.v1.12.0
- EMC_verif-global: roll back to verif_global_v1.11.0
- WAFS: update in Externals.cfg to gfs_wafs.v6.0.19

Notes about local nwprod install changes:

- EMC_post: nwprod install shows upp_gfsv16_release.v1.1.1 tag but contains
local updates found in upp_gfsv16_release.v1.1.3 tag
- WAFS: nwprod install shows gfs_wafs.v6.0.17 tag but contains local updates
found in gfs_wafs.v6.0.19 tag

Refs: NOAA-GSL#1,NOAA-EMC#238
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
Reverting transfer parm file changes committed at 39bab45
27e9112 
- updates to the transfer parm files were erroneously committed after a diff
between nwpara/gfsv16.0.7 and release/gfsv16.0.0 branch; v16.0.7 had been moved
to nwprod/gfsv16.0.7 and transfer parm file diffs were not in final install
- confirmed with SPA Jen that nwprod/gfsv16.0.7 is finalized (it is)
- pulled in transfer parm files from nwprod/gfsv16.0.7 to sync them again

Refs: NOAA-GSL#1,NOAA-EMC#238
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
GFSv16.0.7 release package for operations branch
de7b54e 
Merge remote-tracking branch 'origin/release/gfsv16.0.0' into release/gfsv16.0.0_to_ops

* origin/release/gfsv16.0.0: (1073 commits)
  Reverting transfer parm file changes committed at 39bab45
  Component tag updates for nwprod/gfsv16.0.7
  Updated transfer parm files for gdas, enkf, and gfs dissemination
  Add config.resources.nco.static
  ecflow forecast job resource updates from NCO v16.0.7 install
  Add missing symlinks for WAFS source code folders
  Update EMC_gfs_wafs tag to gfs_wafs.v6.0.19
  Remove KEEPDATA from config.base.nco.static
  Pull in config changes from NCO v16.0.7 install
  Pull in workflow changes from NCO v16.0.7 install
  Update EMC_verif-global tag to verif_global_v1.13.4
  ecFlow resource adjustments from NCO for forecast and post jobs
  issue NOAA-EMC#257 shorten run time on Mars Dell1 file system
  Update Fit2Obs tag to newm.1.3 for bugfix
  Update EMC_verif-global tag for Hera bug
  Pull in nwpara/gfsv16.0.6 updates for parse-storm-type.pl
  Issue NOAA-GSL#1 and issue NOAA-EMC#238 - update Externals.cfg to match checkout.sh updates for v16.0.6
  move errchk definition from script to job for wave prdgen and gempak
  adding definition of errchk which was undefined in these scripts
  Issue NOAA-GSL#1 and issue NOAA-EMC#233 - update GLDAS tag to gldas_gfsv16_release.v1.13.0
  Issue NOAA-GSL#1 and issue NOAA-EMC#241 - update EMC_verif-global tag
  Issue NOAA-GSL#1 and issue NOAA-EMC#238 - remove ak_10m grid from config.wave and update checkout.sh tags for ufs-weather-model and EMC_gfs_wafs
  Issue NOAA-GSL#1 and issue NOAA-EMC#226 - update UPP tag to upp_gfsv16_release.v1.1.3 in Externals.cfg
  Issue NOAA-GSL#1 and issue NOAA-EMC#226 - update UPP tag to upp_gfsv16_release.v1.1.3
  Issue NOAA-GSL#1 and issue NOAA-EMC#226 - update exgfs_atmos_grib2_special_npoess.sh for dbn_alert
  issue NOAA-EMC#227 reducing output bufr files to 64 levels per NCO request
  issue NOAA-EMC#227 reducing output bufr files to 64 levels per NCO request
  Issue NOAA-GSL#1:  update ecflow to be consistent with NCO's gfs.v16.0.4 and            update checkout to bring in new UPP tag (see issue NOAA-EMC#226)
  Upaded ush script scale_dec.sh
  Updated scripts gfs_v16.0
  Issue NOAA-GSL#1 - add grib_util module load to several analysis ecflow scripts
  Issue NOAA-GSL#1 - update WAFS tag to gfs_wafs.v6.0.17 for dbn_alert change
  Issue NOAA-GSL#1 - correct gridded wave parm files for v16.0.3
  Issue NOAA-GSL#1 - changes from NCO for GFSv16.0.3
  Issue NOAA-GSL#1 - update Externals.cfg with final tags for GFSv16.0.2
  Issue NOAA-GSL#1 - correct permissions on jobs/rocoto/postsnd.sh
  Issue NOAA-GSL#1 - update gempak version to 7.3.3 in the ecflow gfs.ver file
  Issue NOAA-GSL#1 - update gempak and dumpjb versions to 7.3.3 and 5.1.0 respectively
  Script alert updates from NCO for wave downstream
  Add override for COMIN_WAV_RTOFS in emc mode for waveprep job
  Issue NOAA-EMC#197:  place CDATE specific sections of config.anal and config.prep inside RUN_ENVIR=emc blocks.              These sections are use for retrospective parallels and therefore do not need to be              executed in operations (NCO).
  modified:   JGLOBAL_FORECAST
  modified:   JGLOBAL_FORECAST to make it work for both emc and nco running environments.
  modified:   JGLOBAL_FORECAST A test showed that jobid is not defined in JGLOBAL_FORECAST running in the Rocoto environment. jobid is defined in ./env files. Defining DATA without sourcing ./env/$nachine.env caused the script to fail.  Move the definitin of DATA after sourcing env parameters
  modified:   checkout.sh to use WAFS tag gfs_wafs.v6.0.16
  modified:   checkout.sh to update UPP to  upp_gfsv16_release.v1.1.1, a minor syntax bug fix
  modified:   link_fv3gfs.sh to 1) use hard copies of external fix fields and executable for NCO installation 2) use soft links for all other files and directories for both NCO and EMC installations
  Compared local files in NCO implementation directory with release/gfs.v16.0.0 branch, changes made by NCO(Jen Yang) in the following files are either accepted or rejected.
  create a new branch release/gfsv16.0.0.nco to merge changes made by NCO in /gpfs/dell1/nco/ops/nwpara/gfs-v16/gfs.v16.0.1 back to EMC's repository
  update for the wave parm so that the wave model will look for the correct restart for when gfs is not run every cycle
  updates for checking if RTOFS files exist and only processing RTOFS files for needed fhr
  Issue NOAA-GSL#1 - update WAFS tag to gfs_wafs.v6.0.14 and update dumpjb version to 5.1.0
  modified:   jobs/JGFS_ATMOS_POSTSND and jobs/rocoto/postsnd.sh to             remove redundant variables in the two scripts and make them             work for both EMC and NCO parallels.
  Issue NOAA-GSL#1 - update WAFS tag to gfs_wafs.v6.0.13
  Rename Release_Notes.gfs.v16.0.0.txt to Release_Notes.gfs.v16.0.0.md
  Issue NOAA-GSL#1 - update WAFS tag to gfs_wafs.v6.0.12 for removal of in-cloud turbulence per AWC
  Issue NOAA-GSL#1 - pull in corrected npe_eobs values in config.resources
  Issue NOAA-GSL#1 - update FV3 tag to GFS.v16.0.14 for Hera/Orion build support
  Issue NOAA-GSL#1 - adjust WAFS dependencies to wait for f036 post output
  Issue NOAA-GSL#1 - adding release notes for GFSv16
  Issue NOAA-EMC#94 producing awips files with masks and deleting wmo headers for arctic ocean
  updates to add glo_30m to the created grib files for waves for awips processing
  Modify gfs/gdas post job to 20 minutes in wall clock.
  Issue NOAA-GSL#1 - update link_fv3gfs.sh to point to newly frozen fix_nco_gfsv16 FIX_DIR
  Modify two wafs jobs trigger as:   jgfs_atmos_wafs_grib2          trigger ../../post/jgfs_atmos_post_f000 == complete   jgfs_atmos_wafs_grib2_0p25     trigger ../../post/jgfs_atmos_post_f036 == complete
  Issue NOAA-GSL#1 - update WAFS tag to gfs_wafs.v6.0.10 and change WAFS job dependencies
  Issue NOAA-GSL#1 - update config.fv3 and config.resources with v16rt2 values
  Issue NOAA-GSL#1 - update gfs_util modulefiles
  Change config.resources for eobs for low resolution cases
  Issue NOAA-GSL#1 - update to fbwndgfs modulefiles for WCOSS-Dell and WCOSS-Cray
  updates to parm to reduce the number of wave variables changes to the config so that wave models are interpolated to the multi_1 masked files for the regional output grids
  Modify module for each job to match implementation package change Modify two wafs jobs trigger Modify wall clock and resource for running jobs in NCO Modify obsproc package location
  add a dependency for the wavepostpnt on wavepostbndpnt for just gfs as this job does not exist for gdas
  Issue NOAA-GSL#1 - update WAFS tag to gfs_wafs.v6.0.9
  Issue NOAA-GSL#1 - remove POE/BACK block from config.prep and set POE=YES/BACK=off as defaults in env/WCOSS_DELL_P3.env prep section
  Issue NOAA-GSL#1 - remove unneeded DMPDIR and ICSDIR from config.base.nco.static
  for rocoto add a dependency to wavepostpnt job on wavepostbndpnt so that both jobs will not run at the same time which will slow both jobs down. This is the reason for the dependency, otherwise there is not a "true" dependency between the jobs
  Issue NOAA-GSL#1 - return POE=YES and BACK=off setting for prep on WCOSS_DELL_P3
  Issue NOAA-GSL#1 - remove hardcoded POE and BACK values from config.prep
  Issue NOAA-GSL#1 - move ABIBF, AHIBF, and HDOB pointers into RUN_ENVIR=emc block
  Issue NOAA-GSL#1 - update config.fv3 based on real-time parallel
  Issue NOAA-GSL#1 - update prep job resources
  Issue NOAA-GSL#1 - update g2tmpl module load in modulefiles/module_base.wcoss_dell_p3
  Issue NOAA-GSL#1 - config updates from real-time parallel
  Issue NOAA-GSL#1 - remove unneeded line in vrfy.sh and update link_fv3gfs.sh for UFS_UTILS execs
  Issue NOAA-GSL#1 - update GSI tag to gfsda.v16.0.0
  Issue NOAA-GSL#1 - update component tags and modulefiles for nwtest lib updates, remove unneeded module load and modulefile from downstream wave job rocoto scripts
  Issue NOAA-GSL#1 - adjust error handling in wave rocoto job scripts
  issue NOAA-EMC#142 generate station i,j grid
  issue NOAA-EMC#142 generate station i,j grid
  issue NOAA-EMC#142 generate station i,j grid
  issue NOAA-EMC#142 add 6 bufr station data
  issue NOAA-EMC#142 add 6 bufr stations for Thailand TMD
  issue NOAA-EMC#145 change dev path to prod for parallel netcdf modules
  issue NOAA-EMC#145 change dev path to prod for parallel netcdf modules
  Issue NOAA-GSL#1 - updates for modules and small fixes
  reverting changes to configs that were not intented to be committed
  fix resource time estimates
  bug fix in exgfs_wave_post_pnt.sh
  update resources and trigger from 192->180
  last of EE2 changes
  updates for EE2 from waves
  Issue NOAA-EMC#94 fix for failing silently
  Issue NOAA-GSL#1 - update WAFS tag to gfs_wafs.v6.0.8
  Issue NOAA-EMC#94 add native grids as default grids
  Issue NOAA-GSL#1:  update name of ncdiag executable and source code directory to be conistent
  cleaning up the rearranged scripts
  Jobs were tested with PDY 20200925, code managers from post, gempak, wave, and post process certified the test run result.
  Issue NOAA-GSL#1:  update parm/config.vrfy to define VSDBJOBSH (used by jobs/rocoto/vrfy.sh)
  Code manager indicated all wafs jobs wall clock is 30 mins. Code manager indicated job card for scripts/gfs/atmos/gempak/jgfs_atmos_pgrb2_spec_gempak.ecf need to be changed
  The EMC realtime parallel does not use operational job settings. Ecflow job card roll back the setting from module_used_gfs-16_job google sheet document.
  Update GLDAS tag to gldas_gfsv16_release.v1.10.0
  Update gfswafs job to run with loop over fcsthrs
  Issue NOAA-GSL#1:  update vrfy.sh to submit vsdb processing as separate job (only on WCOSS_DELL_P3)
  Issue NOAA-EMC#94 add /fakedbn to run DBN_alerts
  Update config.awips for newly named JJOB scripts
  Update WAFS jobs/rocoto scripts to use new JJOB names
  Making J-Job naming change accourding to code manager. Remove temp files
  Update post.sh UPP JJOB script name to submit
  Modify each ecflow script with old j-job name for test.
  Update config.base.nco.static with config.base.emc.dyn changes
  Script name updates for sfc_prep and tracker
  Name change for tropcy scripts and update WAFS tag
  Fixing spelling mistake in config.gldas
  Updated drivers and release notes
  Updated scripts
  Update Externals.cfg with new UPP tag upp_gfsv16_release.v1.0.16.
  1)Update sorc/checkout.sh with new UPP tag upp_gfsv16_release.v1.0.16. 2)Update sorc/link_fv3gfs.sh with new file name convention for jjob and ex-script of post processing part.
  Updated jobs name
  Update EMC_verif-global tag to verif_global_v1.11.0
  Rename scripts to match ecf script naming convention. Add SENDDBN and DBNROOT. Update GLDAS tag.
  In anticipating changes from the GLDAS repo : renaming JGDAS_GLDAS to JGDAS_ATMOS_GLDAS, and exgdas_gldas.sh to exgdas_atmos_gldas.sh
  renamed:    jobs/JGFS_POSTSND -> jobs/JGFS_ATMOS_POSTSND  	renamed:    scripts/exgfs_postsnd.sh -> scripts/exgfs_atmos_postsnd.sh  	modified:   docs/archive/README_bufr  	            driver/product/run_postsnd.sh  	            driver/product/run_postsnd.sh.cray  	            driver/product/run_postsnd.sh.dell  	            driver/product/run_postsnd.sh.hera  	            driver/product/run_postsnd.sh.jet  	            parm/config/config.postsnd
  renamed:    scripts/exglobal_fcst_nemsfv3gfs.sh -> scripts/exglobal_forecast.sh and modified  jobs/JGLOBAL_FORECAST parm/config/config.fcst
  updates for optimizing point jobs
  Issue NOAA-GSL#1 - update SEND variables and add DBNROOT to base configs and add check to build_enkf_chgres_recenter_nc.sh for GSI build
  Issue NOAA-GSL#1 - update to UFS_UTILS ops-gfsv16.0.0 tag
  Issue NOAA-GSL#1 - fix to link_fv3gfs.sh for new GLDAS tag
  Issue NOAA-EMC#131 Unify dbn_alert path
  Issue NOAA-GSL#1:  update to UPP tag "upp_gfsv16_release.v1.0.15"
  Fix for running prep on Hera
  ecflow full day cycle included
  Update WAFS tag to gfs_wafs.v6.0.6
  Small updates: - new UPP tag - new GLDAS tag - new WAFS tag - new module for WAFS - EE2 updates to awips scripts - added WAFS to archival - break downstream and WAFS archival into separate gfs_downstream tarball - update gfsarch dependencies to wait for all wavepost jobs to complete
  Issue NOAA-EMC#131 reduce scripts output to logfile
  Issue NOAA-EMC#131 added a path to DBNROOT
  Adding wafs wave and downstream jobs
  updates for by hour post
  Issue NOAA-GSL#1:  add fhrgrp and fhrlst back to gfsawips in setup_workflow.py (bugfix)
  adding the line to go back a day for RTOFS for the if not NCO section because RTOFS will not be available until 06 cycle
  Restructured ecflow - up to post step
  deleted  relocate_mv_nvortex.fd since storm relocation is no longer needed. modified build_tropcy_NEMS.sh to remove references to relocate_mv_nvortex
  Issue NOAA-GSL#1:  correct DA typos in sorc/link_fv3gfs.sh
  Increase walltime for new wavepost jobs
  Issue NOAA-GSL#1:  update name of DA jobs and scripts in accordance with WCOSS Implementation Standards
  Issue NOAA-EMC#94 add waves-prdgen, ICE->ICEC, Sleep in gempak script
  add gfs gempak downstream jobs into def file
  worked on wcoss
  ecflow script rename after redesign approved - not including all wave jobs
  Issue NOAA-GSL#1:  clean up DA sections of link_fv3gfs.sh
  fix from Bhavani for having first wave grib file be set as a forecast instead of analysis
  fix from Bhavani for having first wave grib file be set as a forecast instead of analysis
  fix from Bhavani for having first wave grib file be set as a forecast instead of analysis
  ecflow gfs v16 nco review 3
  updates to split boundary points plus saving config file updates
  Adding missing space to if-block in env files to resolve runtime failure
  Issue NOAA-GSL#1:  remove pgrb2b.0p25 dependency from gfsawips in setup_workflow.py
  ecflow gfsv16 redesign 2
  Issue NOAA-GSL#1 - update WAFS tag to gfs_wafs.v6.0.4 and remove HOURLY variable from WAFS configs
  Issue NOAA-GSL#1 - change wavegempak and waveawipsgridded dependency to match waveawipsbulls and start when wavepostsbs is complete
  Issue NOAA-GSL#1:  set n_sponge=42 in gfs section of config.fcst
  adding pnt jobs as seperate jobs for env
  moving definitions of wavempexec and wave_mpmd from jobs to env
  Remove unneeded settings from config.post
  Added null DBNROOT to wave awips configs
  add extra script for by hour points for waves
  updates for boundary points by hour parallelization
  lowering the resource requirement for wave prep job
  Issue NOAA-GSL#1:  rename enkf_chgres_recenter executables in accordance with WCOSS Implementation Standards
  modified:   checkout.sh to use gldas_gfsv16_release.v1.6.0
  update module for cdo
  Update to WAFS tag and added SENDDBN_NTC to both base configs
  modified:   link_fv3gfs.sh to not link or copy 0readme fix_chem fix_fv3  fix_sfc_climo which are not used by GFS.v16 and are of large size
  modified:   link_fv3gfs.sh  to remove chgres_cube.fd and chgres_cube.fd in sorc/link_fv3gfs.sh
  modified:   link_fv3gfs.sh to allow "fix" directories to be removed before rerunning             link_fv3gfs.sh for RUN_ENVIR=nco case
  Added WAFS jobs to free-forecast mode, updates for extending WAFS to fh120, and two bug fixes in link_fv3gfs.sh and hpssarch_gen.sh
  Renamed global-workflow-owned ex-scripts to remove ecf extension and updated other scripts which call those ex-scripts
  Remove UFS_UTILS ecf extensions
  Issue NOAA-GSL#1:  (1) update earc.sh directory removal to be consistent with arch.sh, (2) update config files to be consistent with EMC real-time GFS v16 parallel
  Remove ecf script name extensions from downstream wave scripts
  Add new downstream wave jobs to workflow
  Add new downstream WAFS jobs
  Issue NOAA-GSL#1 - update GLDAS and UPP workflow files for removal of ecf script extension
  Issue NOAA-GSL#1:  remove ".ecf" suffix from DA scripts referenced in sorc/link_fv3gfs.sh
  Issue NOAA-GSL#1: remove ".ecf" extension from DA exscripts (as per WCOSS Implementation Standards) referenced from parm/config files
  updates to resources for wave jobs
  Issue NOAA-GSL#1:  update name of DA enkf chgres script in config.echgres
  Issue NOAA-GSL#1:  Rename DA enkf chgres job and script as per EE2 guidance
  Workflow changes for wave gempak and awips downstream jobs
  Fixing wavepostbndpnt dependency in setup_workflow_fcstonly.py
  ...

* conflicts resolved

Refs: NOAA-GSL#1
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
Post-implementation fix in ush/wave_outp_spec.sh
54cb17c 
Merge remote-tracking branch 'origin/release/gfsv16.0.0' into release/gfsv16.0.0_to_ops

* origin/release/gfsv16.0.0:
  Fix cycle date in bull and cbull wave files

Refs: NOAA-GSL#1
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
WAFS tag update (gfs_wafs.v6.0.20) for v16 post-implementation fixes
7f7fa4c 
Tag updates:

    1. Change WAFS 1.25 products (except for icing & turbulence) on model pressure levels.
    2. Add CAT and MWT back to 0.25 WAFS product

Refs: NOAA-GSL#1
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
WAFS tag update (gfs_wafs.v6.0.20) for v16 post-implementation fixes
9a3fcf3 
Refs: NOAA-GSL#1
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
WAFS tag update to gfs_wafs.v6.0.20 in Externals.cfg
c77a449 
Refs: NOAA-GSL#1
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
WAFS tag update to gfs_wafs.v6.0.20 in Externals.cfg
1889411 
Refs: NOAA-GSL#1
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
Back out updates to add config.resources.nco.static
06e9f08 
Will retain in other release branch. Removing to keep continuity with nwprod
for GFSv16 post-implementation fix updates.

Refs: NOAA-GSL#1
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
Additional WAFS tag update to gfs_wafs.v6.0.21 for GFSv16.0.8
1d6893b 
Refs: NOAA-GSL#1
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
Additional WAFS tag update to gfs_wafs.v6.0.21 for GFSv16.0.8
b0b01c6 
Refs: NOAA-GSL#1
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
Revert addition of ecflow trigger for wavepostbndpntbll job
072a31a 
- Remove wavepostbndpntbll trigger from prod def file for each cycle

Refs: NOAA-GSL#1
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
Update util_shared module version to 1.3.0 for wave footer fix
c582db2 
- wave footer fix comes via a new util_shared module version on WCOSS
- update module version to 1.3.0 in module_base.wcoss_dell_p3 and gfs.ver

Refs: NOAA-GSL#1, NOAA-EMC#309
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
WAFS tag update to gfs_wafs.v6.0.22 for bug fix
68d9b5b 
Refs: NOAA-GSL#1,NOAA-EMC#321
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Jul 12, 2021
@KateFriedman-NOAA
Companion update to Externals.cfg for WAFS tag update to gfs_wafs.v6.…
a8ed770 
…0.22

Refs: NOAA-GSL#1,NOAA-EMC#321
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Oct 25, 2022
@KateFriedman-NOAA
Update free-forecast mode chgres jobs for chgres_cube
a7391d7 
Update free-forecast mode to interface with UFS_UTILS
gdas_init utility scripts. Update getic job to use gdas_init get
scripts to pull ICs off HPSS for GFS versions 13 and later.
Rename fv3ic job to "init" and update it to interface with gdas_init
run scripts to run chgres_cube and produce GFSv16 ICs.

Update job dependencies to detect need to run chgres jobs and hold
forecast jobs until ICs are generated or present.

Further updates coming for this task. Tested on WCOSS-Dell, need to
test elsewhere still. Will disable getic job on Orion.

Refs: NOAA-GSL#1, NOAA-EMC#178
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Oct 25, 2022
@KateFriedman-NOAA
Merge remote-tracking branch 'upstream/develop' into issue178
b414ea3 
* upstream/develop:
  Update Fit2Obs tag to newm.1.3 for bugfix
  Update Fit2Obs tag to newm.1.3 for bugfix
  Update EMC_verif-global tag for Hera bug
  Pull in nwpara/gfsv16.0.6 updates for parse-storm-type.pl
  HOTFIX: Update EMC_verif-global tag for Hera bug
  Issue NOAA-GSL#1 and issue NOAA-EMC#238 - update Externals.cfg to match checkout.sh updates for v16.0.6
  move errchk definition from script to job for wave prdgen and gempak
  adding definition of errchk which was undefined in these scripts
  Issue NOAA-EMC#179 and issue NOAA-EMC#243 - update Fit2Obs to newm.1.2 tag and correct COMROOT path for Hera
  HOTFIX: Issue NOAA-EMC#241 - update EMC_verif-global tag to remove use of /tmp space
  Issue NOAA-GSL#1 and issue NOAA-EMC#233 - update GLDAS tag to gldas_gfsv16_release.v1.13.0
  Issue NOAA-GSL#1 and issue NOAA-EMC#241 - update EMC_verif-global tag
  Issue NOAA-GSL#1 and issue NOAA-EMC#238 - remove ak_10m grid from config.wave and update checkout.sh tags for ufs-weather-model and EMC_gfs_wafs
  Issue NOAA-EMC#179 - update to config.vrfy for Fit2Obs tag which supports Orion
  Issue NOAA-GSL#1 and issue NOAA-EMC#226 - update UPP tag to upp_gfsv16_release.v1.1.3 in Externals.cfg
  Issue NOAA-GSL#1 and issue NOAA-EMC#226 - update UPP tag to upp_gfsv16_release.v1.1.3
  Issue NOAA-EMC#233 - remove unnecessary extra space in tag line for gldas
  Issue NOAA-EMC#233 - update GLDAS tag to gldas_gfsv16_release.v1.13.0
  Issue NOAA-GSL#1 and issue NOAA-EMC#226 - update exgfs_atmos_grib2_special_npoess.sh for dbn_alert
  issue NOAA-EMC#227 reducing output bufr files to 64 levels per NCO request
  issue NOAA-EMC#227 reducing output bufr files to 64 levels per NCO request
  Issue NOAA-GSL#1:  update ecflow to be consistent with NCO's gfs.v16.0.4 and            update checkout to bring in new UPP tag (see issue NOAA-EMC#226)
  Upaded ush script scale_dec.sh
  Updated scripts gfs_v16.0

Refs: NOAA-EMC#178
ShanSunNOAA pushed a commit to ShanSunNOAA/global-workflow that referenced this pull request Oct 25, 2022
@KateFriedman-NOAA
Merge remote-tracking branch 'origin/develop' into feature/hpc-stack
2cce21a 
* origin/develop:
  remove flags that were not present in Makefiles
  update jasper to 2.x.25. remove compiler flag in fv3nc2nemsio
  Update EMC_verif-global tag to verif_global_v1.13.4
  another use of _d where an _4 is needed
  Adjust how target is set for build_workflow_utils
  Add workflow_utils to build_all and link scripts
  copy/paste error from enkf_chgres_recenter.fd to enkf_chgres_recenter_nc.fd.  When going from nemsio to netcdf, the linking of ip, sp and w3nco changed from _d to _4.
  update .gitignore to exclude build and install directories as well as compiled files. bugfix in build_workflow_utils.sh hack. nceplibs-ncio now creates the module ncio and not fv3gfs_ncio.
  add cmake build capability for workflow utilities
  Update Fit2Obs tag to newm.1.3 for bugfix
  Update Fit2Obs tag to newm.1.3 for bugfix
  Update EMC_verif-global tag for Hera bug
  Pull in nwpara/gfsv16.0.6 updates for parse-storm-type.pl
  HOTFIX: Update EMC_verif-global tag for Hera bug
  Issue NOAA-GSL#1 and issue NOAA-EMC#238 - update Externals.cfg to match checkout.sh updates for v16.0.6
  move errchk definition from script to job for wave prdgen and gempak
  adding definition of errchk which was undefined in these scripts
  Issue NOAA-GSL#1 and issue NOAA-EMC#233 - update GLDAS tag to gldas_gfsv16_release.v1.13.0
  Issue NOAA-GSL#1 and issue NOAA-EMC#241 - update EMC_verif-global tag
  Issue NOAA-GSL#1 and issue NOAA-EMC#238 - remove ak_10m grid from config.wave and update checkout.sh tags for ufs-weather-model and EMC_gfs_wafs
  Issue NOAA-GSL#1 and issue NOAA-EMC#226 - update UPP tag to upp_gfsv16_release.v1.1.3 in Externals.cfg
  Issue NOAA-GSL#1 and issue NOAA-EMC#226 - update UPP tag to upp_gfsv16_release.v1.1.3
  Issue NOAA-GSL#1 and issue NOAA-EMC#226 - update exgfs_atmos_grib2_special_npoess.sh for dbn_alert
  issue NOAA-EMC#227 reducing output bufr files to 64 levels per NCO request
  issue NOAA-EMC#227 reducing output bufr files to 64 levels per NCO request
  Issue NOAA-GSL#1:  update ecflow to be consistent with NCO's gfs.v16.0.4 and            update checkout to bring in new UPP tag (see issue NOAA-EMC#226)
  Upaded ush script scale_dec.sh
  Updated scripts gfs_v16.0

Conflicts:
	Externals.cfg
	sorc/checkout.sh

Refs: NOAA-EMC#164
jderrico-noaa pushed a commit that referenced this pull request Jan 29, 2024
@jkhender
- merge 23Jun20 port2orion branch, ed6b279, into gsd-ccpp-jet
ea1aa3b 
- updated INFO file

Squashed commit of the following:

commit be717ce
Merge: df8dc52 99277ae
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Tue Jun 23 16:20:51 2020 +0000

    Issue #5 - Sync merge branch 'feature/gfsv16b' into port2orion

    * feature/gfsv16b:
      Update README.md
      modified:   Externals.cfg and  sorc/checkout.sh to check out model tag GFS.v16.0.7    and UPP tag upp_gfsv16_release.v1.0.9.  Changes include:
      Update version of upp in Externals.cfg to be consistent with sorc/checkout.sh

commit 99277ae
Merge: 14dd3c9 4f8d5a5
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Tue Jun 23 16:05:16 2020 +0000

    Merge branch 'feature/gfsv16b' of https://github.com/NOAA-EMC/global-workflow into feature/gfsv16b

commit 4f8d5a5
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Tue Jun 23 11:57:26 2020 -0400

    Update README.md

    Remove use/mention of manage_externals until checkout.sh is retired.

commit 14dd3c9
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Tue Jun 23 15:53:11 2020 +0000

    modified:   Externals.cfg and  sorc/checkout.sh to check out model tag GFS.v16.0.7
       and UPP tag upp_gfsv16_release.v1.0.9.  Changes include:

    1) Inline POST Issues NOAA-EMC#136 and $142
       * Update ceiling height calculation for global FV3.
       * add low,middle,high instantaneous cloud fraction
       * add radar reflectivity at model layers 1 and 2 , and radar reflectivities at 1 and 4-km height.
       * fix a bug in initializing DBZI
       * output mixed layer CAPE/CIN
       * remove simulated GOES-12 brightness temperature.
       * change the names of time averaged low/mid/high cloud fractions in grib2 files
         from "TCDC" to "LCDC/MCDC/HCDC", respectively.

    2) Model Issue NOAA-EMC#152
       * update in-line post control files
       * upgrade post library to 8.0.9 for hera and wcoss_dell_p3

commit dd76002
Merge: df89cc8 dd599ea
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Tue Jun 23 11:34:40 2020 -0400

    Merge pull request NOAA-EMC#91 from christopherwharrop-noaa/feature/fix_externals

    Update version of upp in Externals.cfg to be consistent with sorc/che…

commit dd599ea
Author: Christopher Harrop <Christopher.W.Harrop@noaa.gov>
Date:   Tue Jun 23 15:25:08 2020 +0000

    Update version of upp in Externals.cfg to be consistent with sorc/checkout.sh

commit df8dc52
Merge: ff46607 df89cc8
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Mon Jun 22 14:41:17 2020 +0000

    Issue #5 - Sync merge branch 'feature/gfsv16b' into port2orion

    * feature/gfsv16b:
      Update config.resources
      Issue NOAA-EMC#85:  update DA checkout to point at release/gfsda.v16.0.0
      Issue NOAA-EMC#85:  (1) rename "chgresfcst" as "echgres", (2) add chgres variables to env
      Issue NOAA-EMC#85:  add cfp option to chgresfcst; enable threads with chgresfcst
      add checkout.sh to test on Dell
      Commit changes from debugging addition of chgresfcst on hera
      First draft to add chgresfcst to rocoto workflow

commit df89cc8
Author: RussTreadon-NOAA <26926959+RussTreadon-NOAA@users.noreply.github.com>
Date:   Fri Jun 19 18:40:26 2020 -0400

    Update config.resources

    Generalize setting of echgres threads to be maximum permitted on given platform instead of explicitly setting echgres threads on every platform.

commit ff8cd28
Merge: 1dd83b8 965ff42
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Thu Jun 18 20:07:59 2020 +0000

    Issue #1:  merge branch 'feature/chgresfcst' at 965ff42 into feature/gfsv16b

commit 965ff42
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Thu Jun 18 20:02:23 2020 +0000

    Issue NOAA-EMC#85:  update DA checkout to point at release/gfsda.v16.0.0

commit ff46607
Merge: ed6b279 1dd83b8
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Wed Jun 17 17:23:44 2020 +0000

    Issue #5 - Sync merge branch 'feature/gfsv16b' into port2orion

    * feature/gfsv16b:
      modified:   run_gfsmos_master.sh.dell to still set range=both as the default for running the real-time parallel
      update  checkout.sh to switch back to post version upp_gfsv16_release.v1.0.8.   1.0.9 still has issues.
      Issue #1 - sync Externals.cfg with checkout.sh update for FV3 GFSv16.0.6 tag
      modified:   scripts/run_gfsmos_master.sh.dell to set default verification type o short. modified:   sorc/checkout.sh  updated to model tag GFS.v16.0.6 to fix contrib issue on HERA
      Issue #1 - update Externals.cfg to match updates to checkout.sh
      Update exwave_post_sbs.sh
      Adapting wavepostsbs for running on Hera

commit 71d7141
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Tue Jun 16 20:11:33 2020 +0000

    Issue NOAA-EMC#85:  (1) rename "chgresfcst" as "echgres", (2) add chgres variables to env

commit 1dd83b8
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Tue Jun 16 16:07:45 2020 +0000

    modified:   run_gfsmos_master.sh.dell to still set range=both as the default for running the real-time parallel

commit eb0e3b4
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Tue Jun 16 14:43:29 2020 +0000

    update  checkout.sh to switch back to post version upp_gfsv16_release.v1.0.8.   1.0.9 still has issues.

commit dfc76f0
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Tue Jun 16 13:32:01 2020 +0000

    Issue #1 - sync Externals.cfg with checkout.sh update for FV3 GFSv16.0.6 tag

commit 7078bb5
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Tue Jun 16 13:22:43 2020 +0000

    modified:   scripts/run_gfsmos_master.sh.dell to set default verification type o short.
    modified:   sorc/checkout.sh  updated to model tag GFS.v16.0.6 to fix contrib issue on HERA

commit 15d5bed
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Mon Jun 15 20:47:47 2020 +0000

    Issue NOAA-EMC#85:  add cfp option to chgresfcst; enable threads with chgresfcst

commit d878269
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Mon Jun 15 16:00:35 2020 +0000

    Issue #1 - update Externals.cfg to match updates to checkout.sh

commit a2bd621
Merge: 22b735d 295cd05
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Mon Jun 15 11:57:14 2020 -0400

    Merge pull request NOAA-EMC#84 from NOAA-EMC/feature/gfsv16b_herawavepost

    Adapting wavepostsbs for running on Hera

commit 295cd05
Author: Jose-Henrique Alves <47567389+ajhenrique@users.noreply.github.com>
Date:   Mon Jun 15 11:53:13 2020 -0400

    Update exwave_post_sbs.sh

    Removing obsolete nm variable entries

commit 58d1139
Author: henrique.alves <Henrique.Alves@noaa.gov>
Date:   Thu Jun 11 02:44:41 2020 +0000

    Adapting wavepostsbs for running on Hera

commit c330e60
Author: CoryMartin-NOAA <cory.r.martin@noaa.gov>
Date:   Wed Jun 10 21:17:00 2020 +0000

    add checkout.sh to test on Dell

commit 201609b
Author: CoryMartin-NOAA <cory.r.martin@noaa.gov>
Date:   Wed Jun 10 20:51:51 2020 +0000

    Commit changes from debugging addition of chgresfcst on hera

commit fc3066c
Author: CoryMartin-NOAA <cory.r.martin@noaa.gov>
Date:   Wed Jun 10 14:19:07 2020 +0000

    First draft to add chgresfcst to rocoto workflow
jderrico-noaa pushed a commit that referenced this pull request Jan 29, 2024
@jkhender
- merged 04jan21 develop branch into gsd-ccpp-jet
9186309 
Squashed commit of the following:

commit ef8b64150a0cb7137b1ec48e9c8f3c7e9b3223de
Merge: fca3433b cffc5682
Author: Fanglin Yang <fanglin.yang@noaa.gov>
Date:   Mon Jan 4 10:52:08 2021 -0500

    Merge pull request #231 from yangfanglin/feature/multiple_restart

    modified exglobal_forecast.sh to enable multiple reruns from breakpoint restart initial conditions

commit cffc5682f34eb9ab0bbf42ee11eaa848152c0dbc
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Wed Dec 30 18:43:34 2020 +0000

    modified:   exglobal_forecast.sh
    The breakpoint restart only works for the first restart from a breakpoint. Restart files written
    in RERUN_RESTRAT after the first restart has a 3-hour time shift for DO_IAU=YES cases.
    Forecasts starting from the 2nd breakpoint and beyond will fail becasue of incorrect initial
    conditins.  This commit fixes this bug.

commit fca3433bf869b12cade480e1394688d7b6f95687
Merge: a95cce5f abb168bc
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Fri Dec 18 09:30:21 2020 -0500

    Merge pull request #221 from NOAA-EMC/nco_v16_changes

    NCO changes for v16.0.3

commit abb168bc32fdff7b08ce8ecc54ea832aabf03c44
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Thu Dec 17 19:17:26 2020 +0000

    Issue #1 and issue #220 - set C192/C96/C48 npe_eobs back to dev values for develop

commit 65b4d965fa6ebee445a509a0593e925ae5d5b513
Merge: a95cce5f e89045b9
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Thu Dec 17 18:46:06 2020 +0000

    Issue #1 - merge v16.0.3 changes from NCO into develop

commit e89045b9fb1d9026810ef5c77a3554c67c41718e
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Wed Dec 16 16:38:01 2020 +0000

    Issue #1 - add grib_util module load to several analysis ecflow scripts

commit a95cce5f3e123a241000b209fb50cc8911d13466
Merge: 1562bb97 2646921d
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Tue Dec 15 14:05:27 2020 -0500

    Merge pull request #216 from NOAA-EMC/issue189

    Issue #189 - update ufs-weather-model hash

commit 2646921d0da6dc8a136ebeba6cceceacf3806c23
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Dec 15 18:56:33 2020 +0000

    Issue #189 - update ufs-weather-model hash

commit 1562bb97ac21ce2406ed21f76b7c8d58cecf4a2a
Merge: f3d11b9b 7a9bc00e
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Tue Dec 15 09:51:07 2020 -0500

    Merge pull request #213 from NOAA-EMC/hotfixes

    Hotfixes - issues #201, 202, 208

commit 7a9bc00e367126044f83b0fc9b737386788899a9
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Mon Dec 14 21:35:58 2020 +0000

    Issue #201 - workaround for failing post000 job before hpc-stack solution

commit 425588f711812819744c8060a46444b9d4bf2b63
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Mon Dec 14 21:06:20 2020 +0000

    Issue #1 - update WAFS tag to gfs_wafs.v6.0.17 for dbn_alert change

commit ec5e2e5dd98d80ca3e3d696d5eb19a5a4180c87b
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Mon Dec 14 15:06:16 2020 +0000

    Issue #1 - correct gridded wave parm files for v16.0.3

commit 39246c6e1604e9e81ddc384c951861c43e30cdcf
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Fri Dec 11 19:26:51 2020 +0000

    Issue #1 - changes from NCO for GFSv16.0.3

commit b9f7de8af3cb966fa756e38feaf98ce1f84ee2f3
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Thu Dec 10 19:15:00 2020 +0000

    Issue #1 - update Externals.cfg with final tags for GFSv16.0.2

commit cff28bdbf0daa6980766a011f73e2a021aee2341
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Thu Dec 10 15:59:05 2020 +0000

    Fixes for issue #202 (FINDDATE) and issue #208 (postsnd.sh permissions)

commit 7c7482de947ae686b619fc72e7dd192410b7e0f7
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Thu Dec 10 14:10:25 2020 +0000

    Issue #1 - correct permissions on jobs/rocoto/postsnd.sh

commit dee856c5b54c19cc9de6898908fdb9d4f8d99baa
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Wed Dec 9 20:58:20 2020 +0000

    Issue #1 - update gempak version to 7.3.3 in the ecflow gfs.ver file

commit 0ee264bef7ea71d32426b6b6d77109e73b4235ff
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Wed Dec 9 18:49:54 2020 +0000

    Issue #1 - update gempak and dumpjb versions to 7.3.3 and 5.1.0 respectively

commit b5d97ab6912596d3b343843ba3ef6e8c5f71a21a
Merge: 6da1a24b be5f9ece
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Mon Dec 7 14:49:29 2020 -0500

    Merge pull request #205 from NOAA-EMC/release/gfsv16.0.0.nco

    Script alert updates from NCO for wave downstream

commit be5f9ece8329ee6b18af92d044809f018404669b
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Mon Dec 7 19:45:23 2020 +0000

    Script alert updates from NCO for wave downstream

commit 6da1a24ba89c80ee5f5df38136d03483207d39dd
Merge: ce1ae970 069f2662
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Mon Dec 7 14:12:37 2020 -0500

    Merge pull request #204 from NOAA-EMC/release/gfsv16.0.0.nco

    GFSv16 NCO changes - early December edition

commit 069f2662bc2eabc822f13eec4e2f69f1c39606a8
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Wed Dec 2 20:01:17 2020 +0000

    Add override for COMIN_WAV_RTOFS in emc mode for waveprep job

commit 194f280cf7351d58b0295af35c91e74ac6925d0b
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Mon Nov 30 18:47:19 2020 +0000

    Issue #197:  place CDATE specific sections of config.anal and config.prep inside RUN_ENVIR=emc blocks.
                 These sections are use for retrospective parallels and therefore do not need to be
                 executed in operations (NCO).

commit d82efa8417fe6247ed08cd74a447460ba6bb51f9
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Mon Nov 30 18:06:12 2020 +0000

    modified:   JGLOBAL_FORECAST

commit 25a28c8dacc8659071eca65be15fb4de08b18d80
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Mon Nov 30 17:02:05 2020 +0000

    modified:   JGLOBAL_FORECAST to make it work for both emc and nco running environments.

commit 7283c7e60c98639c6466ce5903ab03c36a7f5f57
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Fri Nov 27 22:16:31 2020 +0000

    modified:   JGLOBAL_FORECAST
    A test showed that jobid is not defined in JGLOBAL_FORECAST running in the Rocoto environment.
    jobid is defined in ./env files. Defining DATA without sourcing ./env/$nachine.env caused the
    script to fail.  Move the definitin of DATA after sourcing env parameters

commit e6003773c0af51bd15eb2bdb6831c99dcce1cc5b
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Tue Nov 24 03:25:23 2020 +0000

    modified:   checkout.sh to use WAFS tag gfs_wafs.v6.0.16

commit bd5294ee6844f8a5adbd04eae78999068c0961a2
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Sat Nov 21 17:32:05 2020 +0000

    modified:   checkout.sh to update UPP to  upp_gfsv16_release.v1.1.1, a minor syntax bug fix

commit 5a516b4cdf0333e4b8316c8cbda7be9f9dccc543
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Fri Nov 20 05:08:33 2020 +0000

    modified:   link_fv3gfs.sh to
    1) use hard copies of external fix fields and executable for NCO installation
    2) use soft links for all other files and directories for both NCO and EMC installations

commit 759cf3341bb400d3b3254a05a624e3ab671ef6cd
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Fri Nov 20 04:51:48 2020 +0000

    Compared local files in NCO implementation directory with release/gfs.v16.0.0 branch,
    changes made by NCO(Jen Yang) in the following files are either accepted or rejected.

    use EMC's updated version
     	modified:   jobs/JGFS_ATMOS_POSTSND

    Use NCO's updated version
     	modified:   jobs/JGLOBAL_FORECAST
     	modified:   jobs/JGLOBAL_WAVE_GEMPAK
     	modified:   jobs/JGLOBAL_WAVE_POST_BNDPNT
     	modified:   jobs/JGLOBAL_WAVE_POST_PNT
     	modified:   jobs/JGLOBAL_WAVE_POST_SBS
     	modified:   jobs/JGLOBAL_WAVE_PRDGEN_BULLS
     	modified:   jobs/JGLOBAL_WAVE_PRDGEN_GRIDDED
     	modified:   parm/config/config.base.nco.static

    Updated by both NCO and EMC
     	modified:   parm/config/config.wave

    Updated gldas tag to gldas_gfsv16_release.v1.12.0
     	modified:   sorc/checkout.sh

commit f39ea0cbbabaa5e69e03cec4db309e2adfb33756
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Thu Nov 19 04:43:17 2020 +0000

    create a new branch release/gfsv16.0.0.nco to merge changes made by NCO
    in /gpfs/dell1/nco/ops/nwpara/gfs-v16/gfs.v16.0.1 back to EMC's repository

    	modified:   ecflow/ecf/scripts/gdas/atmos/analysis/jgdas_atmos_analysis.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/analysis/jgdas_atmos_analysis_calc.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/analysis/jgdas_atmos_analysis_diag.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/gempak/jgdas_atmos_gempak.ecf
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    	modified:   ecflow/ecf/scripts/gfs/atmos/post_processing/grib_wafs/jgfs_atmos_wafs_f66.ecf
    	modified:   ecflow/ecf/scripts/gfs/atmos/post_processing/grib_wafs/jgfs_atmos_wafs_f72.ecf
    	modified:   ecflow/ecf/scripts/gfs/atmos/post_processing/grib_wafs/jgfs_atmos_wafs_f78.ecf
    	modified:   ecflow/ecf/scripts/gfs/atmos/post_processing/grib_wafs/jgfs_atmos_wafs_f84.ecf
    	modified:   ecflow/ecf/scripts/gfs/atmos/post_processing/grib_wafs/jgfs_atmos_wafs_f90.ecf
    	modified:   ecflow/ecf/scripts/gfs/atmos/post_processing/grib_wafs/jgfs_atmos_wafs_f96.ecf
    	modified:   ecflow/ecf/scripts/gfs/atmos/post_processing/jgfs_atmos_wafs_gcip.ecf
    	modified:   ecflow/ecf/scripts/gfs/atmos/verf/jgfs_atmos_vminmon.ecf
    	modified:   ecflow/ecf/scripts/gfs/jgfs_forecast.ecf
    	modified:   ecflow/ecf/scripts/gfs/wave/gempak/jgfs_wave_gempak.ecf
    	modified:   ecflow/ecf/scripts/gfs/wave/init/jgfs_wave_init.ecf
    	modified:   ecflow/ecf/scripts/gfs/wave/post/jgfs_wave_post_bndpnt.ecf
    	modified:   ecflow/ecf/scripts/gfs/wave/post/jgfs_wave_postpnt.ecf
    	modified:   ecflow/ecf/scripts/gfs/wave/post/jgfs_wave_postsbs.ecf
    	modified:   ecflow/ecf/scripts/gfs/wave/post/jgfs_wave_prdgen_bulls.ecf
    	modified:   ecflow/ecf/scripts/gfs/wave/post/jgfs_wave_prdgen_gridded.ecf
    	modified:   ecflow/ecf/scripts/gfs/wave/prep/jgfs_wave_prep.ecf
    	modified:   jobs/JGFS_ATMOS_POSTSND
    	modified:   jobs/JGLOBAL_ATMOS_EMCSFC_SFC_PREP
    	modified:   jobs/JGLOBAL_FORECAST
    	modified:   jobs/JGLOBAL_WAVE_GEMPAK
    	modified:   jobs/JGLOBAL_WAVE_INIT
    	modified:   jobs/JGLOBAL_WAVE_POST_BNDPNT
    	modified:   jobs/JGLOBAL_WAVE_POST_PNT
    	modified:   jobs/JGLOBAL_WAVE_POST_SBS
    	modified:   jobs/JGLOBAL_WAVE_PRDGEN_BULLS
    	modified:   jobs/JGLOBAL_WAVE_PRDGEN_GRIDDED
    	modified:   jobs/JGLOBAL_WAVE_PREP
    	modified:   parm/config/config.wave
    	modified:   parm/transfer_gdas_1a.list
    	modified:   parm/transfer_gdas_1b.list
    	modified:   parm/transfer_gdas_1c.list
    	modified:   parm/transfer_gdas_enkf_enkf_05.list
    	modified:   parm/transfer_gdas_enkf_enkf_10.list
    	modified:   parm/transfer_gdas_enkf_enkf_15.list
    	modified:   parm/transfer_gdas_enkf_enkf_20.list
    	modified:   parm/transfer_gdas_enkf_enkf_25.list
    	modified:   parm/transfer_gdas_enkf_enkf_30.list
    	modified:   parm/transfer_gdas_enkf_enkf_35.list
    	modified:   parm/transfer_gdas_enkf_enkf_40.list
    	modified:   parm/transfer_gdas_enkf_enkf_45.list
    	modified:   parm/transfer_gdas_enkf_enkf_50.list
    	modified:   parm/transfer_gdas_enkf_enkf_55.list
    	modified:   parm/transfer_gdas_enkf_enkf_60.list
    	modified:   parm/transfer_gdas_enkf_enkf_65.list
    	modified:   parm/transfer_gdas_enkf_enkf_70.list
    	modified:   parm/transfer_gdas_enkf_enkf_75.list
    	modified:   parm/transfer_gdas_enkf_enkf_80.list
    	modified:   parm/transfer_gdas_enkf_enkf_misc.list
    	modified:   parm/transfer_gdas_misc.list
    	modified:   parm/transfer_gfs_1.list
    	modified:   parm/transfer_gfs_10a.list
    	modified:   parm/transfer_gfs_10b.list
    	modified:   parm/transfer_gfs_2.list
    	modified:   parm/transfer_gfs_3.list
    	modified:   parm/transfer_gfs_4.list
    	modified:   parm/transfer_gfs_5.list
    	modified:   parm/transfer_gfs_6.list
    	modified:   parm/transfer_gfs_7.list
    	modified:   parm/transfer_gfs_8.list
    	modified:   parm/transfer_gfs_9a.list
    	modified:   parm/transfer_gfs_9b.list
    	modified:   parm/transfer_gfs_misc.list
    	modified:   parm/transfer_rdhpcs_gdas.list
    	modified:   parm/transfer_rdhpcs_gdas_enkf_enkf_1.list
    	modified:   parm/transfer_rdhpcs_gdas_enkf_enkf_2.list
    	modified:   parm/transfer_rdhpcs_gdas_enkf_enkf_3.list
    	modified:   parm/transfer_rdhpcs_gdas_enkf_enkf_4.list
    	modified:   parm/transfer_rdhpcs_gdas_enkf_enkf_5.list
    	modified:   parm/transfer_rdhpcs_gdas_enkf_enkf_6.list
    	modified:   parm/transfer_rdhpcs_gdas_enkf_enkf_7.list
    	modified:   parm/transfer_rdhpcs_gdas_enkf_enkf_8.list
    	modified:   parm/transfer_rdhpcs_gfs.list
    	modified:   parm/transfer_rdhpcs_gfs_nawips.list

commit ce1ae9709fe506f32833910f3cf4f68117c7d0f2
Merge: b096e294 e9d00e41
Author: Fanglin Yang <fanglin.yang@noaa.gov>
Date:   Wed Nov 18 16:55:14 2020 -0500

    Merge pull request #192 from JessicaMeixner-NOAA/bf/waveICfreq

    wave parm update for realease/gfsv16

commit e9d00e41e939fca68a39293b973326531f3c6983
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date:   Wed Nov 18 19:51:25 2020 +0000

    update for the wave parm so that the wave model will look for the
    correct restart for when gfs is not run every cycle

commit f3d11b9bc7e669f4c11266654649c4d5e28f16a9
Merge: e3972f17 32a004aa
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Tue Nov 17 14:01:54 2020 -0500

    Merge pull request #186 from lgannoaa/feature/ccpp

    Initial support for CCPP.

commit 32a004aae3949e8fd3bda7a4f628995317d33f47
Merge: 66cc1a06 036cc113
Author: lgannoaa <37596169+lgannoaa@users.noreply.github.com>
Date:   Tue Nov 17 13:15:37 2020 -0500

    Merge pull request #2 from KateFriedman-NOAA/ccpp

    Adjust efcs walltime and eupd thread value on Orion

commit 036cc113dcd5787ce4bccfb11fb71ed7935bc982
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Nov 17 10:44:02 2020 -0600

    Adjust efcs walltime and eupd thread value on Orion

commit 66cc1a062ba1b430e9ebaf41715997a3de0ff023
Merge: 9e8f9605 2432dc5b
Author: lgannoaa <37596169+lgannoaa@users.noreply.github.com>
Date:   Mon Nov 16 15:48:34 2020 -0500

    Merge pull request #1 from KateFriedman-NOAA/ccpp

    Fix missing COMROOT setting for Orion

commit 2432dc5bbb1b3bc4c317063811333a5b30065794
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Mon Nov 16 14:40:59 2020 -0600

    Fix missing COMROOT setting on Orion

commit 9e8f960508e82f31e9d57da0fc37600b9697e4c9
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Mon Nov 16 18:24:08 2020 +0000

    Modify build_all.sh
    while getopts "oc" option
    to
    while getopts "c" option

commit 587e1986cb5c6307f2d10a01758994ce1155e36d
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Mon Nov 16 18:21:16 2020 +0000

    scripts/exglobal_forecast.sh Merge with v16ccpp

commit 6066462b23d34db815ed73c630ef624c41239215
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Mon Nov 16 17:53:44 2020 +0000

    As requested, using 2e25df5fe952d27355ed58963148f46b82565469 for ufs-weather-model.

commit bf312432b662c3e2b7bd8cd5de19dd5b5ee0c042
Merge: dd7b0068 d59c09c6
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Mon Nov 16 17:41:32 2020 +0000

    Merge remote-tracking branch 'upstream/v16ccpp' into feature/ccpp
    Pull in the iovr=3 in config.fcst

commit dd7b0068cf0b598e58af41a92712e393674d14fd
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Mon Nov 16 14:39:04 2020 +0000

    Modify exglobal_forecast.sh to create namelist in runable sequence.

commit d59c09c6d9445110871da231ef9945d201986f81
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Mon Nov 16 04:06:48 2020 +0000

     	modified:   ../scripts/exglobal_forecast.sh

commit d8aa4423f1a6f2c63c00a4ed5a38a4df6501ef7b
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Mon Nov 16 04:04:43 2020 +0000

    modified checkout.sh to check out a hash instead of head of the develop branch

commit e29fd0c517840a9996987e7ae21f78cc2af8ca12
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Mon Nov 16 03:00:50 2020 +0000

    modified:   ../parm/config/config.fcst and   exglobal_forecast.sh
    1. use iovr for model after https://github.com/NCAR/ccpp-physics/pull/514
       and iovr_sw and iovr_lw for older version of the model, controled by RUN_CCPP
    2. remove the if block and use atmos_model_nml to turn on/off the CCPP option

commit 1ec0ebf31767422a67e3f56c951f5ccb2305c7e5
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Sun Nov 15 17:48:51 2020 -0500

    bug fix exglobal_forecast.sh

commit 336647bcaced053baeee43ef2417b34b6b196439
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Sun Nov 15 12:55:20 2020 -0500

    modified:   exglobal_forecast.sh to add
      min_lakeice  = ${min_lakeice:-"0.15"}
      min_seaice   = ${min_seaice:-"0.15"}

commit 9616b2eef626ce8db2f3a5da343b0a7ece2137cb
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Sun Nov 15 04:05:48 2020 +0000

    modified:   build_fv3.sh

commit fe79b87abbeca26939dbcc1ccd7cb5fb2624e666
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Fri Nov 13 20:11:26 2020 +0000

    Clean up development code from build_all

commit 9cd719d0609cefb3261870528b88c54d24117c47
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Fri Nov 13 19:53:31 2020 +0000

    Modified build_all.sh checkout.sh partial_build.sh to allow switch turn on/off ccpp option
    Turn on CCPP usage:
      checkout.sh -c
      build_all.sh -c
    Turn off CCPP usage:
      checkout.sh
      build_all.sh

commit 8aed1e4d44166ffb6036409bced3ad04f038dfc4
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Fri Nov 13 17:04:07 2020 +0000

    modified:   ../scripts/exglobal_forecast.sh
    modified:   build_all.sh  build_fv3.sh to automatically detect model version, CCPP vs IPD

commit 7826668c6baaf113785e88b79bc059f8a430eace
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Fri Nov 13 15:44:31 2020 +0000

    Remove development configuration from config.nsst

commit 1e5ebe44fd525135114b0fc74a698cadd2eb5eaa
Merge: 0b540d78 b0536156
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Fri Nov 13 15:36:06 2020 +0000

    Merge remote-tracking branch 'upstream/v16ccpp' into feature/ccpp

commit 0b540d78c47755cb0bd68a8dc934461ec1bef345
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Fri Nov 13 15:35:26 2020 +0000

    update eupd resource

commit 267c661710562ab620c07212626268f0201c6c20
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Fri Nov 13 15:31:56 2020 +0000

    Merge with v16ccpp
           modified:   parm/config/config.base.emc.dyn
           modified:   parm/config/config.resources
           modified:   scripts/exglobal_forecast.sh
           modified:   sorc/build_fv3.sh
           modified:   sorc/checkout.sh

commit b0536156ed8383150fc65d5897c6acd17c0df248
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Fri Nov 13 06:30:25 2020 +0000

    modified:   parm/config/config.base.emc.dyn
      parm/config/config.base.nco.static
      scripts/exglobal_forecast.sh
      sorc/build_all.sh
      sorc/build_fv3.sh
      sorc/checkout.sh
     to add the option to check out ufs_weather_model and run with CCPP phsyics

commit b80676925e5dca6c26d8dbf59c8ca74c0efe5fcb
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Thu Nov 12 20:18:08 2020 +0000

    sync config.base.emc.dyn and config.resources with development

commit 6e6fdd79515966f84334e9319dbb3b9cfff9095c
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Thu Nov 12 19:28:06 2020 +0000

    Remove GSD suite file and aero IC extract util

commit 8aed527d4358e131fba73785469d1fec957e619a
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Thu Nov 12 18:23:21 2020 +0000

    deleted:    jobs/rocoto/aeroic.sh

commit d2191414c48835799e578a6010d7dbfdb6babb78
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Thu Nov 12 18:11:43 2020 +0000

     Changes to be committed:
           modified:   jobs/rocoto/fcst.sh
           deleted:    modulefiles/module_base.wcoss_dell_p3_fcst
           deleted:    parm/config/config.aeroic
           modified:   parm/config/config.base.emc.dyn
           modified:   parm/config/config.resources
           modified:   sorc/build_fv3.sh
           modified:   sorc/checkout.sh
           modified:   sorc/link_fv3gfs.sh
           deleted:    ush/load_fv3gfs_modules_fcst.sh
           deleted:    ush/rocoto/setup_workflow_fcstonly_aeroic.py

commit 490f0a73d852f709e1232d4a4a9ee7f3d95d58d9
Merge: 52f59845 e3972f17
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Thu Nov 12 15:49:48 2020 +0000

    Merge remote-tracking branch 'upstream/develop' into feature/ccpp

commit 52f59845f62bd9cc16b6b1197a7de04a4b4a1d86
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Thu Nov 12 15:04:33 2020 +0000

    As of 11/12/2020, this package is tested with a C768 cycled (6 cycle) run on Dell system using FV3_GFS_v16beta (imp_physics=11). The wave components are turned off.
    Ready to merge back to the development.
    The expdir and log files are available on HPSS:
    /NCEPDEV/emc-global/1year/Lin.Gan/WCOSS_DELL_P3/feature_ccpp/FV3_GFS_v16beta/FV3_GFS_v16beta-LOG.tar
    /NCEPDEV/emc-global/1year/Lin.Gan/WCOSS_DELL_P3/feature_ccpp/FV3_GFS_v16beta/FV3_GFS_v16beta-EXPT.tar
    File parm/config/config.resources has been modified to fix EUPD job issue in job card resource.
    File sorc/build_fv3.sh and sorc/link_fv3gfs.sh changed to clear up development remark.
    Removed a developer directory that is not required for FV3_GFS_v16beta confiruration.

commit e3972f1778242d696bcc4eb4a979d46373e8d193
Merge: 9f7eebaf 671856dd
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Fri Nov 6 12:55:23 2020 -0500

    Merge pull request #174 from NOAA-EMC/port2orion

    GFSv16 release hand-off state, Orion support, and additional low res R&D updates

commit b096e2941e4817eace7d8d9e9173ca92a3f72944
Merge: 9fa9ffe9 670b97c2
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Fri Nov 6 10:54:07 2020 -0500

    Merge pull request #173 from JessicaMeixner-NOAA/bugfix/rtofsissues

    Updates for RTOFS preprocessing for wave model

commit 671856ddf96ff4ae2df8a5feacd1b184ce9b8702
Merge: 5383477a 9f7eebaf
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Thu Nov 5 20:43:26 2020 +0000

    Sync merge with develop to resolve conflicts

commit 5383477af879dd671dbab066b41eea7e2428e50f
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Thu Nov 5 18:46:43 2020 +0000

    Change wavepostbndpnt to wait for fcst to end

commit 201abf3e7ed9b5cb66bec43bcb9e4d34b3c6d5f9
Merge: f4ceb182 9fa9ffe9
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Thu Nov 5 12:10:32 2020 -0600

    Merge remote-tracking branch 'origin/release/gfsv16.0.0' into port2orion

    * origin/release/gfsv16.0.0:
      Issue #1 - update WAFS tag to gfs_wafs.v6.0.14 and update dumpjb version to 5.1.0
      modified:   jobs/JGFS_ATMOS_POSTSND and jobs/rocoto/postsnd.sh to             remove redundant variables in the two scripts and make them             work for both EMC and NCO parallels.
      Issue #1 - update WAFS tag to gfs_wafs.v6.0.13
      Rename Release_Notes.gfs.v16.0.0.txt to Release_Notes.gfs.v16.0.0.md
      Issue #1 - update WAFS tag to gfs_wafs.v6.0.12 for removal of in-cloud turbulence per AWC

commit f4ceb182685a5d6d6fb18b2e40c48ae0623a0794
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Thu Nov 5 14:49:08 2020 +0000

    Hera updates for OUTPUT_FILETYPES and resources

commit 896d19529c828a62574c835d6d372701588fe758
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Wed Nov 4 10:19:17 2020 -0600

    Set nth_fcst to 4 for C384 deterministic

commit 37d01e9fc68517c39b66a1ab67453b016666d590
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Nov 3 14:06:59 2020 -0600

    Tie DOIAU_ENKF to DOIAU and add DOIAU check for IAU_OFFSET and IAU_FHROT in config.base

commit 1a11fd21740860275f9be14caf1e615691075414
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Nov 3 14:49:12 2020 +0000

    Increase gfsfcst walltime for C192

commit 670b97c2673054b8d18a004390af0093520b1968
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date:   Mon Nov 2 20:46:33 2020 +0000

    updates for checking if RTOFS files exist and
    only processing RTOFS files for needed fhr

commit 190b78c8d34f60e84c80b47a97cb4184e4e11fd9
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Mon Nov 2 18:41:32 2020 +0000

    Set nth_fcst to 4 for C384 on Hera to handle less memory

commit 713c51eabc40b80e02314b5955b0efab3b235344
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Mon Nov 2 17:54:49 2020 +0000

    Add FDATE calculation to setup scripts and change FDATE in to parsed value in config.base.emc.dyn

commit 306ea5f15120d808760bd58b247b5861a8813670
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Mon Nov 2 10:43:20 2020 -0600

    Reduce C384 nth_fv3 to 1 in config.fv3

commit 9fa9ffe97d23ad69c33658875c9b0c3440c2c97f
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Mon Nov 2 15:24:48 2020 +0000

    Issue #1 - update WAFS tag to gfs_wafs.v6.0.14 and update dumpjb version to 5.1.0

commit 24226384780c9c2438abec1864923f87371798d4
Merge: 70593343 a3b46385
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Fri Oct 30 19:48:13 2020 +0000

    Merge branch 'release/gfsv16.0.0' of https://github.com/NOAA-EMC/global-workflow into release/gfsv16.0.0

commit 705933436f2f42d5fde17b8aa4a57918f2c66b6a
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Fri Oct 30 19:46:51 2020 +0000

    modified:   jobs/JGFS_ATMOS_POSTSND and jobs/rocoto/postsnd.sh to
                remove redundant variables in the two scripts and make them
                work for both EMC and NCO parallels.

commit c9e0566eb2e6179410583c14d48a971a79dc4c88
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Thu Oct 29 20:50:46 2020 +0000

    Revert epos change in setup_workflow.py

commit a3b463859154c1127bb66764a65baa89929a0a5f
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Wed Oct 28 18:18:51 2020 +0000

    Issue #1 - update WAFS tag to gfs_wafs.v6.0.13

commit ab0577de3c4bbbdc58219fd1c95a142cf93b5f4a
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Wed Oct 28 13:52:34 2020 +0000

    Issue #1 - update anal, eobs, and eupd resources for low res

commit 97f1ae89baf37d8bd1940f179fecb6bdc1279fa2
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Tue Oct 27 17:52:28 2020 +0000

    Issue #1 - adjust epos groups for DOIAU/DOIAU_ENKF=NO

commit cb6d74e0c7363f7e54d879a97f457f7d4a37d926
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Mon Oct 26 15:56:58 2020 -0400

    Rename Release_Notes.gfs.v16.0.0.txt to Release_Notes.gfs.v16.0.0.md

commit c09678fb33d0ece36de1af223b5cdf8384d5b9c3
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Mon Oct 26 14:43:09 2020 +0000

    Issue #1 - update WAFS tag to gfs_wafs.v6.0.12 for removal of in-cloud turbulence per AWC

commit 59f08b31916d3585aa9a4832dc9de865e3a350cf
Merge: cbe5ddff 1171a622
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Thu Oct 22 19:47:42 2020 +0000

    Merge remote-tracking branch 'upstream/port2orion' into feature/ccpp

commit cbe5ddff8013a03a9391eead40796f9c30d7ca28
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Thu Oct 22 18:35:49 2020 +0000

    Cycled warm start run using develop ufs-weather-model branch and feature/ccpp using merged branch on the 10/13 (4da0f) with feature/gfsv16b (31563).
    CPP_SUITE="FV3_GFS_v16beta"
    build_fv3 option: CCPP=Y 32BIT=Y SUITES=FV3_GFS_v15,FV3_GSD_v0,FV3_GSD_noah,FV3_GFS_v16beta
    wave is turned off for this test because it's for atmospheric physics and comparison.

commit 1171a62238f0877fc8956df669f07fc9a418c145
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Thu Oct 22 14:01:31 2020 +0000

    Issue #1 - increase wavepostbndpnt and wavepostpnt walltimes to give more time on Hera

commit c3bab19722a8b301e9ac4d2367b7e3e5dc2d88e7
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Wed Oct 21 20:13:38 2020 +0000

    Fix wrong DATE in new if-block in config.anal for cold start checking

commit 636ded675b81b15e8b3af2a211edf44f17972cf0
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Oct 20 19:23:16 2020 +0000

    Issue #1 - add wtime_fcst_gfs time of 4hrs for C384

commit 4007f116adcde8372e590489d0faa0181babbc15
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Oct 20 18:29:15 2020 +0000

    Issue #1 - fix firstcyc queue bug in workflow_utils.py on WCOSS

commit ebdb058fd138a7aa408d69c967747686ea5b77d9
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Oct 20 13:23:05 2020 -0500

    Issue #1 - resource updates from low res testing

    - set io_layout to "1,1" for low res gfs in config.fcst
    - set npe_wav[_gfs] to 140 for all resolutions, same wave grid
    - increase nth_fv3 to 4 for C192 and C384
    - set smaller walltime for gfsfcst when resolutions less than C768

commit 3f0ab6ff2dd4ca42a45e68972b1936d398b32097
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Tue Oct 20 17:55:18 2020 +0000

    Issue #1 - increase C768 npe_eobs to 200 for Hera nodes with less memory

commit d5b69c49ddbd03982db79f09707a49d01ef0b443
Merge: 4ebdd230 794e6655
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Tue Oct 20 16:56:27 2020 +0000

    Merge remote-tracking branch 'origin/release/gfsv16.0.0' into port2orion

    * origin/release/gfsv16.0.0:
      Issue #1 - pull in corrected npe_eobs values in config.resources
      Issue #1 - update FV3 tag to GFS.v16.0.14 for Hera/Orion build support

commit 4ebdd230c121a3c839829aa4ef855d80eb462549
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Tue Oct 20 16:53:46 2020 +0000

    Add UPP netcdf module library load to HERA.env to resolve runtime netcdf version mismatch

commit 794e6655cb227973e47b2373d0e4c97bf297479e
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Oct 20 16:45:58 2020 +0000

    Issue #1 - pull in corrected npe_eobs values in config.resources

commit 1d0cad425b1e163377bba8ace6622bbbb2d81de0
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Mon Oct 19 19:24:55 2020 +0000

    Issue #1 - add parm mon folder to ignore list and move parm section of ignore list up

commit d632c87a8f2ce85d54fa45da14aa09f91a0ec680
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Mon Oct 19 19:20:31 2020 +0000

    Issue #1 - add FDATE to config.base

commit 22d4118f4bc7853fa81f6505fd9aaf5bc6dab4f8
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Mon Oct 19 19:12:29 2020 +0000

    Issue #1 - save GFSv16 hand-off resource settings into new static nco configs

commit 6fd73d7fdf40b291ff49193b606538b540e46139
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Mon Oct 19 19:11:37 2020 +0000

    Issue #1 - new FV3 tag that builds on Hera/Orion and update for building/running high res system on Hera

commit 484550c13d8ef957478f20afd6e722f7f610bb8f
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Fri Oct 16 15:40:35 2020 +0000

    Issue #1 - update FV3 tag to GFS.v16.0.14 for Hera/Orion build support

commit 58dcf6d961f7478fec64a850e7bcd19ffd8f3741
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Thu Oct 15 15:08:38 2020 -0500

    Update .gitignore for script renaming and removed external files

commit e3f8df65082853baa5a22ed3b242efdae66d40ba
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Thu Oct 15 11:59:58 2020 -0500

    Add wave env updates into ORION.env, increase waveinit tasks, and update resources for analysis and efcs walltimes

commit 4da0feaaf8b63ee4662be8be9c5f59d547164b0b
Merge: ee0f27b3 31563a59
Author: lin.gan <lin.gan@noaa.gov>
Date:   Tue Oct 13 20:51:48 2020 +0000

    Merge remote-tracking branch 'origin/feature/gfsv16b' into feature/ccpp

commit e5e7cf1ea61d99080ec95b446c1bee45a57321a3
Merge: a1a7ac94 4b2d26db
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Oct 13 14:25:56 2020 -0500

    Sync merge with release/gfsv16.0.0 branch

commit 4b2d26db3b9b66ecfdd4756bfcddb6e16f255b03
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Oct 13 17:41:24 2020…
jderrico-noaa pushed a commit that referenced this pull request Jan 29, 2024
@jkhender
Merge 05-21 Jan changes from develop branch into gslv16_dev
397b230 
Squashed commit of the following:

commit 479000a5e7b4b9c575784ecca400594525396556
Merge: bbf30008 5a16a7a0
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Thu Jan 21 11:31:41 2021 -0500

    Merge pull request #244 from NOAA-EMC/issue243

    Issue #179 and issue #243 - update Fit2Obs to newm.1.2 tag and correct COMROOT path for Hera

commit 5a16a7a010477b5bbe530a684608b151b8f05755
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Thu Jan 21 16:27:54 2021 +0000

    Issue #179 and issue #243 - update Fit2Obs to newm.1.2 tag and correct COMROOT path for Hera

commit bbf3000856ebb20ca761c6e7d761f5fcefad0228
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Fri Jan 15 18:36:20 2021 +0000

    HOTFIX: Issue #241 - update EMC_verif-global tag to remove use of /tmp space

commit 43ae19be02687cdc362a34e11d299009f3dd8ffc
Merge: c7e6a7f8 48be4d18
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Thu Jan 14 10:35:16 2021 -0500

    Merge pull request #239 from KateFriedman-NOAA/issue179

    Issue #179 - update to config.vrfy for Fit2Obs tag which supports Orion

commit 48be4d18263ea4f1c706c55e4b6b70d87f19c729
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Thu Jan 14 08:38:20 2021 -0600

    Issue #179 - update to config.vrfy for Fit2Obs tag which supports Orion

commit c7e6a7f8c6f7b0d5648b1379633c252f165c2ca6
Merge: ef8b6415 4be7954d
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Wed Jan 13 14:20:49 2021 -0500

    Merge pull request #237 from KateFriedman-NOAA/issue233

    Update GLDAS tag to gldas_gfsv16_release.v1.13.0

commit 4be7954ddcbb56e7ee5167f6d43054d8821b6a4f
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Jan 5 12:06:51 2021 -0600

    Issue #233 - remove unnecessary extra space in tag line for gldas

commit bcbdd12c39124eae14ec0b52d0a05b7c6944c27e
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Jan 5 12:03:15 2021 -0600

    Issue #233 - update GLDAS tag to gldas_gfsv16_release.v1.13.0

commit ef8b64150a0cb7137b1ec48e9c8f3c7e9b3223de
Merge: fca3433b cffc5682
Author: Fanglin Yang <fanglin.yang@noaa.gov>
Date:   Mon Jan 4 10:52:08 2021 -0500

    Merge pull request #231 from yangfanglin/feature/multiple_restart

    modified exglobal_forecast.sh to enable multiple reruns from breakpoint restart initial conditions

commit cffc5682f34eb9ab0bbf42ee11eaa848152c0dbc
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Wed Dec 30 18:43:34 2020 +0000

    modified:   exglobal_forecast.sh
    The breakpoint restart only works for the first restart from a breakpoint. Restart files written
    in RERUN_RESTRAT after the first restart has a 3-hour time shift for DO_IAU=YES cases.
    Forecasts starting from the 2nd breakpoint and beyond will fail becasue of incorrect initial
    conditins.  This commit fixes this bug.

commit fca3433bf869b12cade480e1394688d7b6f95687
Merge: a95cce5f abb168bc
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Fri Dec 18 09:30:21 2020 -0500

    Merge pull request #221 from NOAA-EMC/nco_v16_changes

    NCO changes for v16.0.3

commit abb168bc32fdff7b08ce8ecc54ea832aabf03c44
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Thu Dec 17 19:17:26 2020 +0000

    Issue #1 and issue #220 - set C192/C96/C48 npe_eobs back to dev values for develop

commit 65b4d965fa6ebee445a509a0593e925ae5d5b513
Merge: a95cce5f e89045b9
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Thu Dec 17 18:46:06 2020 +0000

    Issue #1 - merge v16.0.3 changes from NCO into develop

commit e89045b9fb1d9026810ef5c77a3554c67c41718e
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Wed Dec 16 16:38:01 2020 +0000

    Issue #1 - add grib_util module load to several analysis ecflow scripts

commit a95cce5f3e123a241000b209fb50cc8911d13466
Merge: 1562bb97 2646921d
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Tue Dec 15 14:05:27 2020 -0500

    Merge pull request #216 from NOAA-EMC/issue189

    Issue #189 - update ufs-weather-model hash

commit 2646921d0da6dc8a136ebeba6cceceacf3806c23
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Dec 15 18:56:33 2020 +0000

    Issue #189 - update ufs-weather-model hash

commit 1562bb97ac21ce2406ed21f76b7c8d58cecf4a2a
Merge: f3d11b9b 7a9bc00e
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Tue Dec 15 09:51:07 2020 -0500

    Merge pull request #213 from NOAA-EMC/hotfixes

    Hotfixes - issues #201, 202, 208

commit 7a9bc00e367126044f83b0fc9b737386788899a9
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Mon Dec 14 21:35:58 2020 +0000

    Issue #201 - workaround for failing post000 job before hpc-stack solution

commit 425588f711812819744c8060a46444b9d4bf2b63
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Mon Dec 14 21:06:20 2020 +0000

    Issue #1 - update WAFS tag to gfs_wafs.v6.0.17 for dbn_alert change

commit ec5e2e5dd98d80ca3e3d696d5eb19a5a4180c87b
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Mon Dec 14 15:06:16 2020 +0000

    Issue #1 - correct gridded wave parm files for v16.0.3

commit 39246c6e1604e9e81ddc384c951861c43e30cdcf
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Fri Dec 11 19:26:51 2020 +0000

    Issue #1 - changes from NCO for GFSv16.0.3

commit b9f7de8af3cb966fa756e38feaf98ce1f84ee2f3
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Thu Dec 10 19:15:00 2020 +0000

    Issue #1 - update Externals.cfg with final tags for GFSv16.0.2

commit cff28bdbf0daa6980766a011f73e2a021aee2341
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Thu Dec 10 15:59:05 2020 +0000

    Fixes for issue #202 (FINDDATE) and issue #208 (postsnd.sh permissions)

commit 7c7482de947ae686b619fc72e7dd192410b7e0f7
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Thu Dec 10 14:10:25 2020 +0000

    Issue #1 - correct permissions on jobs/rocoto/postsnd.sh

commit dee856c5b54c19cc9de6898908fdb9d4f8d99baa
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Wed Dec 9 20:58:20 2020 +0000

    Issue #1 - update gempak version to 7.3.3 in the ecflow gfs.ver file

commit 0ee264bef7ea71d32426b6b6d77109e73b4235ff
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Wed Dec 9 18:49:54 2020 +0000

    Issue #1 - update gempak and dumpjb versions to 7.3.3 and 5.1.0 respectively

commit b5d97ab6912596d3b343843ba3ef6e8c5f71a21a
Merge: 6da1a24b be5f9ece
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Mon Dec 7 14:49:29 2020 -0500

    Merge pull request #205 from NOAA-EMC/release/gfsv16.0.0.nco

    Script alert updates from NCO for wave downstream

commit be5f9ece8329ee6b18af92d044809f018404669b
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Mon Dec 7 19:45:23 2020 +0000

    Script alert updates from NCO for wave downstream

commit 6da1a24ba89c80ee5f5df38136d03483207d39dd
Merge: ce1ae970 069f2662
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Mon Dec 7 14:12:37 2020 -0500

    Merge pull request #204 from NOAA-EMC/release/gfsv16.0.0.nco

    GFSv16 NCO changes - early December edition

commit 069f2662bc2eabc822f13eec4e2f69f1c39606a8
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Wed Dec 2 20:01:17 2020 +0000

    Add override for COMIN_WAV_RTOFS in emc mode for waveprep job

commit 194f280cf7351d58b0295af35c91e74ac6925d0b
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Mon Nov 30 18:47:19 2020 +0000

    Issue #197:  place CDATE specific sections of config.anal and config.prep inside RUN_ENVIR=emc blocks.
                 These sections are use for retrospective parallels and therefore do not need to be
                 executed in operations (NCO).

commit d82efa8417fe6247ed08cd74a447460ba6bb51f9
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Mon Nov 30 18:06:12 2020 +0000

    modified:   JGLOBAL_FORECAST

commit 25a28c8dacc8659071eca65be15fb4de08b18d80
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Mon Nov 30 17:02:05 2020 +0000

    modified:   JGLOBAL_FORECAST to make it work for both emc and nco running environments.

commit 7283c7e60c98639c6466ce5903ab03c36a7f5f57
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Fri Nov 27 22:16:31 2020 +0000

    modified:   JGLOBAL_FORECAST
    A test showed that jobid is not defined in JGLOBAL_FORECAST running in the Rocoto environment.
    jobid is defined in ./env files. Defining DATA without sourcing ./env/$nachine.env caused the
    script to fail.  Move the definitin of DATA after sourcing env parameters

commit e6003773c0af51bd15eb2bdb6831c99dcce1cc5b
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Tue Nov 24 03:25:23 2020 +0000

    modified:   checkout.sh to use WAFS tag gfs_wafs.v6.0.16

commit bd5294ee6844f8a5adbd04eae78999068c0961a2
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Sat Nov 21 17:32:05 2020 +0000

    modified:   checkout.sh to update UPP to  upp_gfsv16_release.v1.1.1, a minor syntax bug fix

commit 5a516b4cdf0333e4b8316c8cbda7be9f9dccc543
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Fri Nov 20 05:08:33 2020 +0000

    modified:   link_fv3gfs.sh to
    1) use hard copies of external fix fields and executable for NCO installation
    2) use soft links for all other files and directories for both NCO and EMC installations

commit 759cf3341bb400d3b3254a05a624e3ab671ef6cd
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Fri Nov 20 04:51:48 2020 +0000

    Compared local files in NCO implementation directory with release/gfs.v16.0.0 branch,
    changes made by NCO(Jen Yang) in the following files are either accepted or rejected.

    use EMC's updated version
     	modified:   jobs/JGFS_ATMOS_POSTSND

    Use NCO's updated version
     	modified:   jobs/JGLOBAL_FORECAST
     	modified:   jobs/JGLOBAL_WAVE_GEMPAK
     	modified:   jobs/JGLOBAL_WAVE_POST_BNDPNT
     	modified:   jobs/JGLOBAL_WAVE_POST_PNT
     	modified:   jobs/JGLOBAL_WAVE_POST_SBS
     	modified:   jobs/JGLOBAL_WAVE_PRDGEN_BULLS
     	modified:   jobs/JGLOBAL_WAVE_PRDGEN_GRIDDED
     	modified:   parm/config/config.base.nco.static

    Updated by both NCO and EMC
     	modified:   parm/config/config.wave

    Updated gldas tag to gldas_gfsv16_release.v1.12.0
     	modified:   sorc/checkout.sh

commit f39ea0cbbabaa5e69e03cec4db309e2adfb33756
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Thu Nov 19 04:43:17 2020 +0000

    create a new branch release/gfsv16.0.0.nco to merge changes made by NCO
    in /gpfs/dell1/nco/ops/nwpara/gfs-v16/gfs.v16.0.1 back to EMC's repository

    	modified:   ecflow/ecf/scripts/gdas/atmos/analysis/jgdas_atmos_analysis.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/analysis/jgdas_atmos_analysis_calc.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/analysis/jgdas_atmos_analysis_diag.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/gempak/jgdas_atmos_gempak.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/gempak/jgdas_atmos_gempak_meta_ncdc.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/init/jgdas_atmos_gldas.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/obsproc/dump/jgdas_atmos_dump.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/obsproc/dump/jgdas_atmos_dump_alert.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/obsproc/dump/jgdas_atmos_dump_post.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/obsproc/dump/jgdas_atmos_tropcy_qc_reloc.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/obsproc/prep/jgdas_atmos_emcsfc_sfc_prep.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/obsproc/prep/jgdas_atmos_prep.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/obsproc/prep/jgdas_atmos_prep_post.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/post/jgdas_atmos_post_anl.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/post/jgdas_atmos_post_f000.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/post/jgdas_atmos_post_f001.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/post/jgdas_atmos_post_f002.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/post/jgdas_atmos_post_f003.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/post/jgdas_atmos_post_f004.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/post/jgdas_atmos_post_f005.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/post/jgdas_atmos_post_f006.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/post/jgdas_atmos_post_f007.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/post/jgdas_atmos_post_f008.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/post/jgdas_atmos_post_f009.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/post/jgdas_atmos_post_manager.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/post_processing/jgdas_atmos_chgres_forenkf.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/verf/jgdas_atmos_verfozn.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/verf/jgdas_atmos_verfrad.ecf
    	modified:   ecflow/ecf/scripts/gdas/atmos/verf/jgdas_atmos_vminmon.ecf
    	modified:   ecflow/ecf/scripts/gdas/enkf/analysis/create/jgdas_enkf_diag.ecf
    	modified:   ecflow/ecf/scripts/gdas/enkf/analysis/create/jgdas_enkf_select_obs.ecf
    	modified:   ecflow/ecf/scripts/gdas/enkf/analysis/create/jgdas_enkf_update.ecf
    	modified:   ecflow/ecf/scripts/gdas/enkf/analysis/recenter/ecen/jgdas_enkf_ecen.ecf
    	modified:   ecflow/ecf/scripts/gdas/enkf/analysis/recenter/jgdas_enkf_sfc.ecf
    	modified:   ecflow/ecf/scripts/gdas/enkf/forecast/jgdas_enkf_fcst.ecf
    	modified:   ecflow/ecf/scripts/gdas/jgdas_forecast.ecf
    	modified:   ecflow/ecf/scripts/gdas/wave/init/jgdas_wave_init.ecf
    	modified:   ecflow/ecf/scripts/gdas/wave/post/jgdas_wave_postpnt.ecf
    	modified:   ecflow/ecf/scripts/gdas/wave/post/jgdas_wave_postsbs.ecf
    	modified:   ecflow/ecf/scripts/gdas/wave/prep/jgdas_wave_prep.ecf
    	modified:   ecflow/ecf/scripts/gfs/atmos/analysis/jgfs_atmos_analysis.ecf
    	modified:   ecflow/ecf/scripts/gfs/atmos/analysis/jgfs_atmos_analysis_calc.ecf
    	modified:   ecflow/ecf/scripts/gfs/atmos/gempak/jgfs_atmos_gempak.ecf
    	modified:   ecflow/ecf/scripts/gfs/atmos/gempak/jgfs_atmos_gempak_meta.ecf
    	modified:   ecflow/ecf/scripts/gfs/atmos/gempak/jgfs_atmos_gempak_ncdc_upapgif.ecf
    	modified:   ecflow/ecf/scripts/gfs/atmos/gempak/jgfs_atmos_npoess_pgrb2_0p5deg.ecf
    	modified:   ecflow/ecf/scripts/gfs/atmos/gempak/jgfs_atmos_pgrb2_spec_gempak.ecf
    	modified:   ecflow/ecf/scripts/gfs/atmos/obsproc/dump/jgfs_atmos_dump.ecf
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    	modified:   parm/transfer_rdhpcs_gdas.list
    	modified:   parm/transfer_rdhpcs_gdas_enkf_enkf_1.list
    	modified:   parm/transfer_rdhpcs_gdas_enkf_enkf_2.list
    	modified:   parm/transfer_rdhpcs_gdas_enkf_enkf_3.list
    	modified:   parm/transfer_rdhpcs_gdas_enkf_enkf_4.list
    	modified:   parm/transfer_rdhpcs_gdas_enkf_enkf_5.list
    	modified:   parm/transfer_rdhpcs_gdas_enkf_enkf_6.list
    	modified:   parm/transfer_rdhpcs_gdas_enkf_enkf_7.list
    	modified:   parm/transfer_rdhpcs_gdas_enkf_enkf_8.list
    	modified:   parm/transfer_rdhpcs_gfs.list
    	modified:   parm/transfer_rdhpcs_gfs_nawips.list

commit ce1ae9709fe506f32833910f3cf4f68117c7d0f2
Merge: b096e294 e9d00e41
Author: Fanglin Yang <fanglin.yang@noaa.gov>
Date:   Wed Nov 18 16:55:14 2020 -0500

    Merge pull request #192 from JessicaMeixner-NOAA/bf/waveICfreq

    wave parm update for realease/gfsv16

commit e9d00e41e939fca68a39293b973326531f3c6983
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date:   Wed Nov 18 19:51:25 2020 +0000

    update for the wave parm so that the wave model will look for the
    correct restart for when gfs is not run every cycle

commit f3d11b9bc7e669f4c11266654649c4d5e28f16a9
Merge: e3972f17 32a004aa
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Tue Nov 17 14:01:54 2020 -0500

    Merge pull request #186 from lgannoaa/feature/ccpp

    Initial support for CCPP.

commit 32a004aae3949e8fd3bda7a4f628995317d33f47
Merge: 66cc1a06 036cc113
Author: lgannoaa <37596169+lgannoaa@users.noreply.github.com>
Date:   Tue Nov 17 13:15:37 2020 -0500

    Merge pull request #2 from KateFriedman-NOAA/ccpp

    Adjust efcs walltime and eupd thread value on Orion

commit 036cc113dcd5787ce4bccfb11fb71ed7935bc982
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Nov 17 10:44:02 2020 -0600

    Adjust efcs walltime and eupd thread value on Orion

commit 66cc1a062ba1b430e9ebaf41715997a3de0ff023
Merge: 9e8f9605 2432dc5b
Author: lgannoaa <37596169+lgannoaa@users.noreply.github.com>
Date:   Mon Nov 16 15:48:34 2020 -0500

    Merge pull request #1 from KateFriedman-NOAA/ccpp

    Fix missing COMROOT setting for Orion

commit 2432dc5bbb1b3bc4c317063811333a5b30065794
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Mon Nov 16 14:40:59 2020 -0600

    Fix missing COMROOT setting on Orion

commit 9e8f960508e82f31e9d57da0fc37600b9697e4c9
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Mon Nov 16 18:24:08 2020 +0000

    Modify build_all.sh
    while getopts "oc" option
    to
    while getopts "c" option

commit 587e1986cb5c6307f2d10a01758994ce1155e36d
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Mon Nov 16 18:21:16 2020 +0000

    scripts/exglobal_forecast.sh Merge with v16ccpp

commit 6066462b23d34db815ed73c630ef624c41239215
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Mon Nov 16 17:53:44 2020 +0000

    As requested, using 2e25df5fe952d27355ed58963148f46b82565469 for ufs-weather-model.

commit bf312432b662c3e2b7bd8cd5de19dd5b5ee0c042
Merge: dd7b0068 d59c09c6
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Mon Nov 16 17:41:32 2020 +0000

    Merge remote-tracking branch 'upstream/v16ccpp' into feature/ccpp
    Pull in the iovr=3 in config.fcst

commit dd7b0068cf0b598e58af41a92712e393674d14fd
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Mon Nov 16 14:39:04 2020 +0000

    Modify exglobal_forecast.sh to create namelist in runable sequence.

commit d59c09c6d9445110871da231ef9945d201986f81
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Mon Nov 16 04:06:48 2020 +0000

     	modified:   ../scripts/exglobal_forecast.sh

commit d8aa4423f1a6f2c63c00a4ed5a38a4df6501ef7b
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Mon Nov 16 04:04:43 2020 +0000

    modified checkout.sh to check out a hash instead of head of the develop branch

commit e29fd0c517840a9996987e7ae21f78cc2af8ca12
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Mon Nov 16 03:00:50 2020 +0000

    modified:   ../parm/config/config.fcst and   exglobal_forecast.sh
    1. use iovr for model after https://github.com/NCAR/ccpp-physics/pull/514
       and iovr_sw and iovr_lw for older version of the model, controled by RUN_CCPP
    2. remove the if block and use atmos_model_nml to turn on/off the CCPP option

commit 1ec0ebf31767422a67e3f56c951f5ccb2305c7e5
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Sun Nov 15 17:48:51 2020 -0500

    bug fix exglobal_forecast.sh

commit 336647bcaced053baeee43ef2417b34b6b196439
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Sun Nov 15 12:55:20 2020 -0500

    modified:   exglobal_forecast.sh to add
      min_lakeice  = ${min_lakeice:-"0.15"}
      min_seaice   = ${min_seaice:-"0.15"}

commit 9616b2eef626ce8db2f3a5da343b0a7ece2137cb
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Sun Nov 15 04:05:48 2020 +0000

    modified:   build_fv3.sh

commit fe79b87abbeca26939dbcc1ccd7cb5fb2624e666
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Fri Nov 13 20:11:26 2020 +0000

    Clean up development code from build_all

commit 9cd719d0609cefb3261870528b88c54d24117c47
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Fri Nov 13 19:53:31 2020 +0000

    Modified build_all.sh checkout.sh partial_build.sh to allow switch turn on/off ccpp option
    Turn on CCPP usage:
      checkout.sh -c
      build_all.sh -c
    Turn off CCPP usage:
      checkout.sh
      build_all.sh

commit 8aed1e4d44166ffb6036409bced3ad04f038dfc4
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Fri Nov 13 17:04:07 2020 +0000

    modified:   ../scripts/exglobal_forecast.sh
    modified:   build_all.sh  build_fv3.sh to automatically detect model version, CCPP vs IPD

commit 7826668c6baaf113785e88b79bc059f8a430eace
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Fri Nov 13 15:44:31 2020 +0000

    Remove development configuration from config.nsst

commit 1e5ebe44fd525135114b0fc74a698cadd2eb5eaa
Merge: 0b540d78 b0536156
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Fri Nov 13 15:36:06 2020 +0000

    Merge remote-tracking branch 'upstream/v16ccpp' into feature/ccpp

commit 0b540d78c47755cb0bd68a8dc934461ec1bef345
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Fri Nov 13 15:35:26 2020 +0000

    update eupd resource

commit 267c661710562ab620c07212626268f0201c6c20
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Fri Nov 13 15:31:56 2020 +0000

    Merge with v16ccpp
           modified:   parm/config/config.base.emc.dyn
           modified:   parm/config/config.resources
           modified:   scripts/exglobal_forecast.sh
           modified:   sorc/build_fv3.sh
           modified:   sorc/checkout.sh

commit b0536156ed8383150fc65d5897c6acd17c0df248
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Fri Nov 13 06:30:25 2020 +0000

    modified:   parm/config/config.base.emc.dyn
      parm/config/config.base.nco.static
      scripts/exglobal_forecast.sh
      sorc/build_all.sh
      sorc/build_fv3.sh
      sorc/checkout.sh
     to add the option to check out ufs_weather_model and run with CCPP phsyics

commit b80676925e5dca6c26d8dbf59c8ca74c0efe5fcb
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Thu Nov 12 20:18:08 2020 +0000

    sync config.base.emc.dyn and config.resources with development

commit 6e6fdd79515966f84334e9319dbb3b9cfff9095c
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Thu Nov 12 19:28:06 2020 +0000

    Remove GSD suite file and aero IC extract util

commit 8aed527d4358e131fba73785469d1fec957e619a
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Thu Nov 12 18:23:21 2020 +0000

    deleted:    jobs/rocoto/aeroic.sh

commit d2191414c48835799e578a6010d7dbfdb6babb78
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Thu Nov 12 18:11:43 2020 +0000

     Changes to be committed:
           modified:   jobs/rocoto/fcst.sh
           deleted:    modulefiles/module_base.wcoss_dell_p3_fcst
           deleted:    parm/config/config.aeroic
           modified:   parm/config/config.base.emc.dyn
           modified:   parm/config/config.resources
           modified:   sorc/build_fv3.sh
           modified:   sorc/checkout.sh
           modified:   sorc/link_fv3gfs.sh
           deleted:    ush/load_fv3gfs_modules_fcst.sh
           deleted:    ush/rocoto/setup_workflow_fcstonly_aeroic.py

commit 490f0a73d852f709e1232d4a4a9ee7f3d95d58d9
Merge: 52f59845 e3972f17
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Thu Nov 12 15:49:48 2020 +0000

    Merge remote-tracking branch 'upstream/develop' into feature/ccpp

commit 52f59845f62bd9cc16b6b1197a7de04a4b4a1d86
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Thu Nov 12 15:04:33 2020 +0000

    As of 11/12/2020, this package is tested with a C768 cycled (6 cycle) run on Dell system using FV3_GFS_v16beta (imp_physics=11). The wave components are turned off.
    Ready to merge back to the development.
    The expdir and log files are available on HPSS:
    /NCEPDEV/emc-global/1year/Lin.Gan/WCOSS_DELL_P3/feature_ccpp/FV3_GFS_v16beta/FV3_GFS_v16beta-LOG.tar
    /NCEPDEV/emc-global/1year/Lin.Gan/WCOSS_DELL_P3/feature_ccpp/FV3_GFS_v16beta/FV3_GFS_v16beta-EXPT.tar
    File parm/config/config.resources has been modified to fix EUPD job issue in job card resource.
    File sorc/build_fv3.sh and sorc/link_fv3gfs.sh changed to clear up development remark.
    Removed a developer directory that is not required for FV3_GFS_v16beta confiruration.

commit e3972f1778242d696bcc4eb4a979d46373e8d193
Merge: 9f7eebaf 671856dd
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Fri Nov 6 12:55:23 2020 -0500

    Merge pull request #174 from NOAA-EMC/port2orion

    GFSv16 release hand-off state, Orion support, and additional low res R&D updates

commit b096e2941e4817eace7d8d9e9173ca92a3f72944
Merge: 9fa9ffe9 670b97c2
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Fri Nov 6 10:54:07 2020 -0500

    Merge pull request #173 from JessicaMeixner-NOAA/bugfix/rtofsissues

    Updates for RTOFS preprocessing for wave model

commit 671856ddf96ff4ae2df8a5feacd1b184ce9b8702
Merge: 5383477a 9f7eebaf
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Thu Nov 5 20:43:26 2020 +0000

    Sync merge with develop to resolve conflicts

commit 5383477af879dd671dbab066b41eea7e2428e50f
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Thu Nov 5 18:46:43 2020 +0000

    Change wavepostbndpnt to wait for fcst to end

commit 201abf3e7ed9b5cb66bec43bcb9e4d34b3c6d5f9
Merge: f4ceb182 9fa9ffe9
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Thu Nov 5 12:10:32 2020 -0600

    Merge remote-tracking branch 'origin/release/gfsv16.0.0' into port2orion

    * origin/release/gfsv16.0.0:
      Issue #1 - update WAFS tag to gfs_wafs.v6.0.14 and update dumpjb version to 5.1.0
      modified:   jobs/JGFS_ATMOS_POSTSND and jobs/rocoto/postsnd.sh to             remove redundant variables in the two scripts and make them             work for both EMC and NCO parallels.
      Issue #1 - update WAFS tag to gfs_wafs.v6.0.13
      Rename Release_Notes.gfs.v16.0.0.txt to Release_Notes.gfs.v16.0.0.md
      Issue #1 - update WAFS tag to gfs_wafs.v6.0.12 for removal of in-cloud turbulence per AWC

commit f4ceb182685a5d6d6fb18b2e40c48ae0623a0794
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Thu Nov 5 14:49:08 2020 +0000

    Hera updates for OUTPUT_FILETYPES and resources

commit 896d19529c828a62574c835d6d372701588fe758
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Wed Nov 4 10:19:17 2020 -0600

    Set nth_fcst to 4 for C384 deterministic

commit 37d01e9fc68517c39b66a1ab67453b016666d590
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Nov 3 14:06:59 2020 -0600

    Tie DOIAU_ENKF to DOIAU and add DOIAU check for IAU_OFFSET and IAU_FHROT in config.base

commit 1a11fd21740860275f9be14caf1e615691075414
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Nov 3 14:49:12 2020 +0000

    Increase gfsfcst walltime for C192

commit 670b97c2673054b8d18a004390af0093520b1968
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date:   Mon Nov 2 20:46:33 2020 +0000

    updates for checking if RTOFS files exist and
    only processing RTOFS files for needed fhr

commit 190b78c8d34f60e84c80b47a97cb4184e4e11fd9
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Mon Nov 2 18:41:32 2020 +0000

    Set nth_fcst to 4 for C384 on Hera to handle less memory

commit 713c51eabc40b80e02314b5955b0efab3b235344
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Mon Nov 2 17:54:49 2020 +0000

    Add FDATE calculation to setup scripts and change FDATE in to parsed value in config.base.emc.dyn

commit 306ea5f15120d808760bd58b247b5861a8813670
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Mon Nov 2 10:43:20 2020 -0600

    Reduce C384 nth_fv3 to 1 in config.fv3

commit 9fa9ffe97d23ad69c33658875c9b0c3440c2c97f
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Mon Nov 2 15:24:48 2020 +0000

    Issue #1 - update WAFS tag to gfs_wafs.v6.0.14 and update dumpjb version to 5.1.0

commit 24226384780c9c2438abec1864923f87371798d4
Merge: 70593343 a3b46385
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Fri Oct 30 19:48:13 2020 +0000

    Merge branch 'release/gfsv16.0.0' of https://github.com/NOAA-EMC/global-workflow into release/gfsv16.0.0

commit 705933436f2f42d5fde17b8aa4a57918f2c66b6a
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Fri Oct 30 19:46:51 2020 +0000

    modified:   jobs/JGFS_ATMOS_POSTSND and jobs/rocoto/postsnd.sh to
                remove redundant variables in the two scripts and make them
                work for both EMC and NCO parallels.

commit c9e0566eb2e6179410583c14d48a971a79dc4c88
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Thu Oct 29 20:50:46 2020 +0000

    Revert epos change in setup_workflow.py

commit a3b463859154c1127bb66764a65baa89929a0a5f
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Wed Oct 28 18:18:51 2020 +0000

    Issue #1 - update WAFS tag to gfs_wafs.v6.0.13

commit ab0577de3c4bbbdc58219fd1c95a142cf93b5f4a
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Wed Oct 28 13:52:34 2020 +0000

    Issue #1 - update anal, eobs, and eupd resources for low res

commit 97f1ae89baf37d8bd1940f179fecb6bdc1279fa2
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Tue Oct 27 17:52:28 2020 +0000

    Issue #1 - adjust epos groups for DOIAU/DOIAU_ENKF=NO

commit cb6d74e0c7363f7e54d879a97f457f7d4a37d926
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Mon Oct 26 15:56:58 2020 -0400

    Rename Release_Notes.gfs.v16.0.0.txt to Release_Notes.gfs.v16.0.0.md

commit c09678fb33d0ece36de1af223b5cdf8384d5b9c3
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Mon Oct 26 14:43:09 2020 +0000

    Issue #1 - update WAFS tag to gfs_wafs.v6.0.12 for removal of in-cloud turbulence per AWC

commit 59f08b31916d3585aa9a4832dc9de865e3a350cf
Merge: cbe5ddff 1171a622
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Thu Oct 22 19:47:42 2020 +0000

    Merge remote-tracking branch 'upstream/port2orion' into feature/ccpp

commit cbe5ddff8013a03a9391eead40796f9c30d7ca28
Author: Lin.Gan <lin.gan@noaa.gov>
Date:   Thu Oct 22 18:35:49 2020 +0000

    Cycled warm start run using develop ufs-weather-model branch and feature/ccpp using merged branch on the 10/13 (4da0f) with feature/gfsv16b (31563).
    CPP_SUITE="FV3_GFS_v16beta"
    build_fv3 option: CCPP=Y 32BIT=Y SUITES=FV3_GFS_v15,FV3_GSD_v0,FV3_GSD_noah,FV3_GFS_v16beta
    wave is turned off for this test because it's for atmospheric physics and comparison.

commit 1171a62238f0877fc8956df669f07fc9a418c145
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Thu Oct 22 14:01:31 2020 +0000

    Issue #1 - increase wavepostbndpnt and wavepostpnt walltimes to give more time on Hera

commit c3bab19722a8b301e9ac4d2367b7e3e5dc2d88e7
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Wed Oct 21 20:13:38 2020 +0000

    Fix wrong DATE in new if-block in config.anal for cold start checking

commit 636ded675b81b15e8b3af2a211edf44f17972cf0
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Oct 20 19:23:16 2020 +0000

    Issue #1 - add wtime_fcst_gfs time of 4hrs for C384

commit 4007f116adcde8372e590489d0faa0181babbc15
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Oct 20 18:29:15 2020 +0000

    Issue #1 - fix firstcyc queue bug in workflow_utils.py on WCOSS

commit ebdb058fd138a7aa408d69c967747686ea5b77d9
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Oct 20 13:23:05 2020 -0500

    Issue #1 - resource updates from low res testing

    - set io_layout to "1,1" for low res gfs in config.fcst
    - set npe_wav[_gfs] to 140 for all resolutions, same wave grid
    - increase nth_fv3 to 4 for C192 and C384
    - set smaller walltime for gfsfcst when resolutions less than C768

commit 3f0ab6ff2dd4ca42a45e68972b1936d398b32097
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Tue Oct 20 17:55:18 2020 +0000

    Issue #1 - increase C768 npe_eobs to 200 for Hera nodes with less memory

commit d5b69c49ddbd03982db79f09707a49d01ef0b443
Merge: 4ebdd230 794e6655
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Tue Oct 20 16:56:27 2020 +0000

    Merge remote-tracking branch 'origin/release/gfsv16.0.0' into port2orion

    * origin/release/gfsv16.0.0:
      Issue #1 - pull in corrected npe_eobs values in config.resources
      Issue #1 - update FV3 tag to GFS.v16.0.14 for Hera/Orion build support

commit 4ebdd230c121a3c839829aa4ef855d80eb462549
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Tue Oct 20 16:53:46 2020 +0000

    Add UPP netcdf module library load to HERA.env to resolve runtime netcdf version mismatch

commit 794e6655cb227973e47b2373d0e4c97bf297479e
Author: kate.friedman <kate.friedman@noaa.gov>
Date:   Tue Oct 20 16:45:58 2020 +0000

    Issue #1 - pull in corrected npe_eobs values in config.resources

commit 1d0cad425b1e163377bba8ace6622bbbb2d81de0
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Mon Oct 19 19:24:55 2020 +0000
…
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