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DMSC: a dynamic multi-seeds method for clustering 16S rRNA sequences into OTUs

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DMSC 2018/01/01 ver1.0.0 ICI/LIFT, China

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System Requirements

Software Requirements

The DMSC is supported on the following operating systems

Linux Windows 7 Windows 10

Hardware Requirements/Recommendations

Intel Core i3 2100 or later for Windows Color display capable of 1024 X 768 pixel resolution

Memory Requirements/Recommendations

DMSC requires approximately 200 M of available disk space on the drive or partition.

DMSC requires a minimum of 2G of RAM for clustering 16S rRNA dataset.

User's Guide

Input Sequences Requirements

Input file requires fasta or fastq format

Execute Step

Step 1: compile codes using make command Step 2: ./dmsc then comes out help information Step 3: The final clustering results are presented in text formats and can be found in the input file directory.

Copyright Notice

Software, documentation and related materials: Copyright (c) 2019-2021 Institute of Control & Information(ICI), Northwestern Polytechnical University,China Key Laboratory of Information Fusion Technology(LIFT), Ministry of Education, China All rights reserved.

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DMSC: a dynamic multi-seeds method for clustering 16S rRNA sequences into OTUs

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