r-modules: update cran and bioc package lists

[PhDyellow]

nix-build test-evaluation.nix --dry-run passes.

Arrow is now v4.0.0, which matches with Arrow-cpp
version in master, see #81761.

Removes "DSpat" "cit" "ProbForecastGOP" "DSpat"
"dgmb" "rtiff" "rpg" from default.nix, these packages
have been removed from CRAN.

Motivation for this change

R package set is out of date.
Issue #81761 manually updated a single package, but recommended updating all packages when possible.
Used modified code from PR #122408, but the result should be independent of that PR.

Things done

• Tested using sandboxing (nix.useSandbox on NixOS, or option sandbox in nix.conf on non-NixOS linux)
• Built on platform(s)
  • NixOS
  • macOS
  • other Linux distributions
• Tested via one or more NixOS test(s) if existing and applicable for the change (look inside nixos/tests)
• Tested compilation of all pkgs that depend on this change using nix-shell -p nixpkgs-review --run "nixpkgs-review wip"
• Tested execution of all binary files (usually in ./result/bin/)
• Determined the impact on package closure size (by running nix path-info -S before and after)
• Ensured that relevant documentation is up to date
• Fits CONTRIBUTING.md.

[PhDyellow]

Fixed up some packages that failed to build with the new CRAN and BioC verions.

[peti]

Test builds are running at https://hydra.nixos.org/jobset/nixpkgs/r-updates.

[PhDyellow]

I didn't know about the test builds, very useful!

I see a lot of failed builds happen because of packages that were removed from CRAN.

[PhDyellow]

Closing in favour of #121819