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delly: 0.8.1 -> 0.8.2 #79778

Merged
merged 1 commit into from Feb 11, 2020
Merged

delly: 0.8.1 -> 0.8.2 #79778

merged 1 commit into from Feb 11, 2020

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@jbedo
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@jbedo jbedo commented Feb 10, 2020

Bumped version and backported patch to fix building with htslib 1.10.2.

Motivation for this change

Previous expression was broken by 940d12b

Things done
  • Tested using sandboxing (nix.useSandbox on NixOS, or option sandbox in nix.conf on non-NixOS linux)
  • Built on platform(s)
    • NixOS
    • macOS
    • other Linux distributions
  • Tested via one or more NixOS test(s) if existing and applicable for the change (look inside nixos/tests)
  • Tested compilation of all pkgs that depend on this change using nix-shell -p nixpkgs-review --run "nixpkgs-review wip"
  • Tested execution of all binary files (usually in ./result/bin/)
  • Determined the impact on package closure size (by running nix path-info -S before and after)
  • Ensured that relevant documentation is up to date
  • Fits CONTRIBUTING.md.

@scalavision

Backported patch required for htslib 1.10.2
@jbedo jbedo force-pushed the jbedo:delly branch from 0b55cd6 to a8fe9e7 Feb 11, 2020
@veprbl
veprbl approved these changes Feb 11, 2020
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@veprbl veprbl left a comment

Fixes the build, executable runs

@veprbl veprbl merged commit 5f2a3be into NixOS:master Feb 11, 2020
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delly on aarch64-linux
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delly on x86_64-linux
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Evaluation Performance Report Evaluator Performance Report
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grahamcofborg-eval ^.^!
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grahamcofborg-eval-check-maintainers matching changed paths to changed attrs...
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grahamcofborg-eval-check-meta config.nix: checkMeta = true
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grahamcofborg-eval-darwin nix-instantiate --arg nixpkgs { outPath=./.; revCount=999999; shortRev="ofborg"; } ./pkgs/top-level/release.nix -A darwin-tested
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grahamcofborg-eval-nixos nix-instantiate --arg nixpkgs { outPath=./.; revCount=999999; shortRev="ofborg"; } ./nixos/release-combined.nix -A tested
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grahamcofborg-eval-nixos-manual nix-instantiate --arg nixpkgs { outPath=./.; revCount=999999; shortRev="ofborg"; } ./nixos/release.nix -A manual
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grahamcofborg-eval-nixos-options nix-instantiate --arg nixpkgs { outPath=./.; revCount=999999; shortRev="ofborg"; } ./nixos/release.nix -A options
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grahamcofborg-eval-nixpkgs-manual nix-instantiate --arg nixpkgs { outPath=./.; revCount=999999; shortRev="ofborg"; } ./pkgs/top-level/release.nix -A manual
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grahamcofborg-eval-nixpkgs-tarball nix-instantiate --arg nixpkgs { outPath=./.; revCount=999999; shortRev="ofborg"; } ./pkgs/top-level/release.nix -A tarball
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grahamcofborg-eval-nixpkgs-unstable-jobset nix-instantiate --arg nixpkgs { outPath=./.; revCount=999999; shortRev="ofborg"; } ./pkgs/top-level/release.nix -A unstable
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grahamcofborg-eval-package-list nix-env -qa --json --file .
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grahamcofborg-eval-package-list-no-aliases nix-env -qa --json --file . --arg config { allowAliases = false; }
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@veprbl
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@veprbl veprbl commented Feb 11, 2020

Ported to 20.03 in 1781000

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