Release notes v20211004
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This guide can provide you more background on how to read the release notes.
What's new
- We released the updated version of ATC (07-Sep-2021 version with 2022 additions). New concepts were added and hierarchical relationships were improved. We will soon publish a more detailed article about the ATC work.
- New ICDO Topography-Histology combinations were added. All metastatic ICDO Conditions are mapped to the Cancer Modifier vocabulary now. Going forward this will be the common practice of metastatic cancer mapping. SNOMED secondary malignant neoplasm concepts will be made non-standard in the next SNOMED release.
- Cancer Modifier Metastasis concept class was cleaned up, some redundant codes were de-standardized.
- OMOP Extension: we added the EORTC Quality of Life Questionnaire С30 and the EuroQol five dimension three level scale to the OMOP Extension vocabulary as well as some specific Immunoglobulin lab tests and Meas values.
- ISBT has received its regular update with 28-Sep-2021 version.
- NDC has received its regular update with 03-Oct-2021 version.
Domain changes
there were no changes here
Newly added concepts grouped by Vocabulary_id and Domain
| vocabulary_id | domain_id | count |
|---|---|---|
| ATC | Drug | 344 |
| Cancer Modifier | Measurement | 2 |
| ICDO3 | Condition | 125 |
| ISBT | Device | 29 |
| ISBT Attribute | Observation | 3 |
| NDC | Device | 6 |
| NDC | Drug | 4228 |
| OMOP Extension | Measurement | 12 |
| OMOP Extension | Meas Value | 7 |
| OMOP Extension | Observation | 30 |
| SPL | Drug | 4926 |
Standard concept changes
| vocabulary_id | old_standard_concept | new_standard_concept | count |
|---|---|---|---|
| ATC | Classification | Non-standard with mapping | 76 |
| ATC | Classification | Non-standard without mapping | 7 |
| ATC | Classification | Non-standard with mapping | 3 |
| Cancer Modifier | Standard | Non-standard without mapping | 5 |
| Cancer Modifier | Standard | Non-standard with mapping | 4 |
| ICDO3 | Standard | Non-standard with mapping | 34 |
| ICDO3 | Non-standard with mapping | Standard | 1 |
| SPL | Classification | Non-standard with mapping | 1 |
Newly added concepts and their standard concept status
| vocabulary_id | new_standard_concept | count |
|---|---|---|
| ATC | Non-standard without mapping | 3 |
| ATC | Classification | 60 |
| ATC | Non-standard with mapping | 86 |
| ATC | Classification | 229 |
| Cancer Modifier | Standard | 2 |
| CDM | Standard | 113 |
| ICDO3 | Non-standard with mapping | 125 |
| ISBT | Standard | 29 |
| ISBT Attribute | Classification | 3 |
| NDC | Standard | 6 |
| NDC | Non-standard with mapping | 483 |
| NDC | Non-standard without mapping | 3745 |
| OMOP Extension | Standard | 49 |
| SPL | Classification | 4926 |
Changes of concept mapping status grouped by target domain
| vocabulary_id | Old target Domain/Status | New target Domain/Status | count |
|---|---|---|---|
| ATC | Drug | No mapping | 9 |
| ATC | New concept | Drug | 281 |
| ATC | No mapping | Device | 1 |
| ATC | No mapping | Drug | 195 |
| ATC | No mapping | Observation | 2 |
| Cancer Modifier | Measurement | No mapping | 5 |
| Cancer Modifier | New concept | Measurement | 2 |
| CDM | New concept | Metadata | 113 |
| ICD10CN | Condition | No mapping | 9 |
| ICDO3 | Condition | Measurement | 251 |
| ICDO3 | New concept | Measurement | 125 |
| ISBT | New concept | Device | 29 |
| NDC | New concept | Device | 6 |
| NDC | New concept | Drug | 483 |
| NDC | No mapping | Drug | 3267 |
| OMOP Extension | New concept | Measurement | 12 |
| OMOP Extension | New concept | Meas Value | 7 |
| OMOP Extension | New concept | Observation | 30 |
| SNOMED | Condition/Measurement | Condition | 1 |
New vocabularies added
there were no changes here
If you have any questions, please try to find the answers on http://forums.ohdsi.org. If you can't find it, please ask here: http://forums.ohdsi.org/t/vocabulary-release-questions/6650