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PDBe EMBL-EBI

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  1. arpeggio arpeggio Public

    Calculation of interatomic interactions in molecular structures

    Python 63 19

  2. pdbe-api-training pdbe-api-training Public

    Interactive Python notebooks for PDBe API training

    Jupyter Notebook 44 18

  3. ccdutils ccdutils Public

    A set of python tools to deal with PDB chemical components definitions for small molecules, taken from the wwPDB Chemical Component Dictionary, uses RDKit

    Python 34 5

  4. pdb-images pdb-images Public

    Generates images from mmCIF/BCIF files

    TypeScript 31 4

  5. pdbecif pdbecif Public

    A lightweight pure python package for reading, writing and manipulating mmCIF files distributed by the wwPDB"

    Python 30 4

  6. PDBe_Programming PDBe_Programming Public

    PDBe Programming Interfaces information

    Jupyter Notebook 13 5

Repositories

Showing 10 of 36 repositories
  • PDBeurope/ner_for_protein_structures’s past year of commit activity
    Python 1 0 0 0 Updated Jul 17, 2024
  • protein-cluster-conformers Public

    Clusters protein chains based on CA distance difference

    PDBeurope/protein-cluster-conformers’s past year of commit activity
    Python 9 0 0 0 Updated Jul 5, 2024
  • heatmap-component Public

    Canvas-based Interactive Heatmap Component

    PDBeurope/heatmap-component’s past year of commit activity
    TypeScript 1 Apache-2.0 0 0 0 Updated Jul 4, 2024
  • pdbe-api-training Public

    Interactive Python notebooks for PDBe API training

    PDBeurope/pdbe-api-training’s past year of commit activity
    Jupyter Notebook 44 18 0 0 Updated Jun 20, 2024
  • PDBeurope/pdbe-notebooks’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Jun 12, 2024
  • PDBeurope/afdb-notebooks’s past year of commit activity
    Jupyter Notebook 0 CC0-1.0 0 0 0 Updated Jun 5, 2024
  • ccdutils Public

    A set of python tools to deal with PDB chemical components definitions for small molecules, taken from the wwPDB Chemical Component Dictionary, uses RDKit

    PDBeurope/ccdutils’s past year of commit activity
    Python 34 Apache-2.0 5 1 1 Updated Jun 2, 2024
  • arpeggio Public

    Calculation of interatomic interactions in molecular structures

    PDBeurope/arpeggio’s past year of commit activity
    Python 63 GPL-3.0 19 9 6 Updated May 24, 2024
  • ccdc-hotspots Public Forked from ccdc-opensource/hotspots

    A knowledge-based method for determining small molecule binding "hotspots".

    PDBeurope/ccdc-hotspots’s past year of commit activity
    HTML 0 MIT 17 0 0 Updated Apr 23, 2024
  • pdb-images Public

    Generates images from mmCIF/BCIF files

    PDBeurope/pdb-images’s past year of commit activity
    TypeScript 31 Apache-2.0 4 0 0 Updated Feb 8, 2024

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