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Issues: PNNL-CompBio/coderdata

Continuous Integration Via Github Actions (Overview)
#57 opened Dec 5, 2023 by jjacobson95
Open 3
Documentation Overview
#70 by jjacobson95 was closed May 31, 2024
Closed 2
Update Main Page README
#109 by jjacobson95 was closed Jun 5, 2024
Closed
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23 Open 103 Closed
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Issues list

build script no longer works in proper order
#193 opened Jun 19, 2024 by sgosline
@jjacobson95
contributing page has no details
#189 opened Jun 5, 2024 by sgosline
@sgosline
2
create utility script to conform to common cancer types enhancement New feature or request
#185 opened May 21, 2024 by sgosline
@sgosline
tutorial missing download step
#162 opened May 1, 2024 by sgosline
@jjacobson95
broad_sanger samples file has quotes around all values - (breaking Polars during testing) data_not_aligned_to_schema
#160 opened Apr 30, 2024 by jjacobson95
@jjacobson95
5
Convert Python Package from Pandas to Polars enhancement New feature or request package
#159 opened Apr 29, 2024 by jjacobson95
@jjacobson95
8
Ensure all datasets have the same transcriptomics normalization metric Harmonization
#154 opened Apr 24, 2024 by jjacobson95
@sgosline
3
consider adding PDX data new data Request for additional data to be added
#146 opened Apr 11, 2024 by sgosline
@sgosline
3
add in kids first brain tumor cell line data new data Request for additional data to be added
#144 opened Apr 9, 2024 by sgosline
populate drugs structure property table new data Request for additional data to be added
#142 opened Apr 9, 2024 by sgosline
1
@sgosline
5
Drug generation Uncaught Failures bug Something isn't working
#125 opened Mar 29, 2024 by jjacobson95
@jjacobson95
Update CI to use GetBeatAML.py instead of beataml_drug_retrieval.py bug Something isn't working
#119 opened Mar 26, 2024 by jjacobson95
@jjacobson95
new feature: download all data by type enhancement New feature or request package
#111 opened Mar 11, 2024 by sgosline
@jjacobson95
8
Add PDO data from pancreatic patients (~70) new data Request for additional data to be added
#106 opened Feb 27, 2024 by sgosline
@sgosline
add in sanger drug combination data new data Request for additional data to be added
#94 opened Feb 6, 2024 by sgosline
@sgosline
1
Consider building static versioned docker images enhancement New feature or request
#88 opened Jan 29, 2024 by sgosline
@jjacobson95
6
Add next-gen CMap L100 to perturbations data set new data Request for additional data to be added
#84 opened Jan 26, 2024 by BelindaBGarana
Add in protein-protein interaction data new data Request for additional data to be added
#63 opened Dec 14, 2023 by sgosline
CircRNA Cell Line Data new data Request for additional data to be added
#62 opened Dec 14, 2023 by jjacobson95
Create Status Badges for Readme. enhancement New feature or request
#58 opened Dec 6, 2023 by jjacobson95
Continuous Integration Via Github Actions (Overview) documentation Improvements or additions to documentation enhancement New feature or request
#57 opened Dec 5, 2023 by jjacobson95
27 of 34 tasks
@sgosline @jjacobson95
3
Create a strategy for updating builds with new data versions enhancement New feature or request
#55 opened Nov 30, 2023 by sgosline
@sgosline
new dataset request: Add in metabolomics data from ccle new data Request for additional data to be added
#46 opened Nov 13, 2023 by BelindaBGarana
@sgosline
ProTip! no:milestone will show everything without a milestone.