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Documentation Overview #70

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15 of 17 tasks
jjacobson95 opened this issue Dec 27, 2023 · 2 comments
Closed
15 of 17 tasks

Documentation Overview #70

jjacobson95 opened this issue Dec 27, 2023 · 2 comments
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documentation Improvements or additions to documentation

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@jjacobson95
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jjacobson95 commented Dec 27, 2023

  • Create Base page
  • Format Header
  • Dynamically update Header links for each Figshare version
  • Finalize Logo
  • Complete Main page
  • Complete HCMI page
  • Complete BeatAML page
  • Complete CPTAC page
  • Complete Cell Line page
  • Complete Usage page with all info on functions and nuances
  • Complete Contribution page
  • Complete Secondary Contribution page with info on code/data additions from users.
  • Create all links between pages
  • Dynamically update Visualization on all pages
  • Dynamically update tables on all four dataset pages
  • Dynamically update stats
  • Finalize styling

Each dataset page needs:
Two plots, Table, Description

@jjacobson95 jjacobson95 added the documentation Improvements or additions to documentation label Dec 27, 2023
@jjacobson95 jjacobson95 self-assigned this Dec 27, 2023
@jjacobson95 jjacobson95 pinned this issue Dec 27, 2023
@sgosline
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sgosline commented Jan 9, 2024

Can we add in 'example code' for each function? I'd like
1- examples of omics data (download, calculate a gene or two expression across different datasets (maybe same cell line)
2- example of drug data (download, plot drug AUCs across same cell line, different datasets)

@jjacobson95
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This one fell off the radar for me, I'll work on it when I get a chance though. Could you clarify on the calculating gene expression example - is this imputation example?

And I will also include a deep learning model example using the keras functional API in python.

@jjacobson95 jjacobson95 unpinned this issue Oct 16, 2024
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