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PlanesLab

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  1. gMCSpy gMCSpy Public

    Efficient calculation of gMCS in python.

    Python 6 1

  2. BN-BacArena BN-BacArena Public

    Bayesian Network implementation of BacArena

    MATLAB 2

  3. AGREDA_1.1 AGREDA_1.1 Public

    Forked from francesco-balzerani/AGREDA_1.1

    Python 1

  4. q2-metnet q2-metnet Public

    QIIME 2 plugin to contextualize taxonomic abundance data into high-quality metabolic reconstruction of the human gut microbiota

    Python 1 3

  5. AGREDA AGREDA Public

    Forked from tblasco/AGREDA

    AGREDA (AGORA-based REconstruction for Diet Analysis) is a new repository of genome-scale metabolic models of human gut microbes.

    MATLAB

  6. iMR_gmcs_paper_scripts iMR_gmcs_paper_scripts Public

    Scripts to generate all the results and the figures in the paper of iMR gmcs calculation

    MATLAB 1

Repositories

Showing 9 of 9 repositories
  • gmctool Public Forked from lvalcarcel/gmctool

    A tool for discovering metabolic vulnerabilities in cancer research

    PlanesLab/gmctool’s past year of commit activity
    R 0 GPL-3.0 2 0 0 Updated Oct 22, 2024
  • q2-metnet Public

    QIIME 2 plugin to contextualize taxonomic abundance data into high-quality metabolic reconstruction of the human gut microbiota

    PlanesLab/q2-metnet’s past year of commit activity
    Python 1 3 0 0 Updated Oct 1, 2024
  • gMCSpy Public

    Efficient calculation of gMCS in python.

    PlanesLab/gMCSpy’s past year of commit activity
    Python 6 MIT 1 0 0 Updated Aug 19, 2024
  • BN-BacArena Public

    Bayesian Network implementation of BacArena

    PlanesLab/BN-BacArena’s past year of commit activity
    MATLAB 2 0 0 0 Updated Mar 11, 2024
  • gmcs_meta_analysis Public

    Scripts to generate all the results and the figures in the paper of gmctool meta-analysis

    PlanesLab/gmcs_meta_analysis’s past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Nov 16, 2023
  • AGREDA Public Forked from tblasco/AGREDA

    AGREDA (AGORA-based REconstruction for Diet Analysis) is a new repository of genome-scale metabolic models of human gut microbes.

    PlanesLab/AGREDA’s past year of commit activity
    MATLAB 0 2 0 0 Updated Nov 1, 2023
  • iMR_gmcs Public Forked from PlanesLab/iMR_gmcs_paper_scripts

    Scripts to generate all the results and the figures in the paper of iMR gmcs calculation

    PlanesLab/iMR_gmcs’s past year of commit activity
    MATLAB 0 MIT 1 0 0 Updated May 19, 2023
  • iMR_gmcs_paper_scripts Public

    Scripts to generate all the results and the figures in the paper of iMR gmcs calculation

    PlanesLab/iMR_gmcs_paper_scripts’s past year of commit activity
    MATLAB 0 MIT 1 0 0 Updated May 19, 2023
  • AGREDA_1.1 Public Forked from francesco-balzerani/AGREDA_1.1
    PlanesLab/AGREDA_1.1’s past year of commit activity
    Python 1 2 0 0 Updated Apr 27, 2023

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