Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Fixed zarr metadata read, minimal xml, and backend autoselect #3

Merged
merged 5 commits into from
Jun 5, 2021

Conversation

Nicholas-Schaub
Copy link
Contributor

This PR fixes 3 bugs:

  1. The ZarrReader backend did not properly read metadata due to an improper search for metadata.
  2. Initializing any BioWriter always threw an error if no metadata object was supplied. It now properly initializes properly and generates minimal OME xml metadata.
  3. The automated backend selector and backend validator would throw an error if any periods were in the filename. It now properly checks file extensions, even when a period might be present in the file name.

@Nicholas-Schaub Nicholas-Schaub merged commit fd71a6e into PolusAI:dev Jun 5, 2021
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant