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Add tensorstore zarr writer #87

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merged 9 commits into from
Jul 23, 2024
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JesseMckinzie
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  • Add tensorstore zarr writer from bfiocpp
  • Add unit test for zarr writer
  • Fix potential bug in calculating tile bounds

src/bfio/bfio.py Outdated
Comment on lines 1351 to 1354
# Ensure end is not out of boudns
X_tile_end = min(X_tile_end, self._DIMS["X"])
Y_tile_end = min(Y_tile_end, self._DIMS["Y"])

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For now, do this only when self._backend_name=="tensorstore".

Comment on lines 46 to 50
# def tearDownModule():
# """Remove test images"""

# logger.info("teardown - Removing test images...")
# shutil.rmtree(TEST_DIR)
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Uncomment this

@sameeul sameeul merged commit 2dc4be2 into PolusAI:master Jul 23, 2024
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2 participants