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ProGenNo

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  1. ProHap ProHap Public

    Proteogenomics database-generation tool for protein haplotypes and variants

    Python 6 2

  2. VariantPeptideIdentification VariantPeptideIdentification Public

    Code related to the "Retention time and fragmentation predictors increase confidence in identification of common variant peptides" publication

    Python 1

  3. py-pgatk-UiB-fork py-pgatk-UiB-fork Public

    Forked from bigbio/py-pgatk

    Python tools for proteogenomics analysis toolkit

    Python

  4. FindingHaploSignatures FindingHaploSignatures Public

    Code related to the "Finding Haplotypic Signatures in Proteins" publication

    Python

  5. ProHapDatabaseAnalysis ProHapDatabaseAnalysis Public

    Pipeline to analyze protein databases created by ProHap / ProVar

    Jupyter Notebook

  6. ProHap_PeptideAnnotator ProHap_PeptideAnnotator Public

    Pipeline to annotate peptide identifications when using protein databases made by of ProHap / ProVar

    Python

Repositories

Showing 7 of 7 repositories
  • ProHap Public

    Proteogenomics database-generation tool for protein haplotypes and variants

    ProGenNo/ProHap’s past year of commit activity
    Python 6 MIT 2 0 0 Updated Nov 1, 2024
  • ProHap_PeptideAnnotator Public

    Pipeline to annotate peptide identifications when using protein databases made by of ProHap / ProVar

    ProGenNo/ProHap_PeptideAnnotator’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 20, 2024
  • ProHapDatabaseAnalysis Public

    Pipeline to analyze protein databases created by ProHap / ProVar

    ProGenNo/ProHapDatabaseAnalysis’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Oct 10, 2024
  • PeptideShaker_tutorial Public

    Tutorial for the navigation of proteomics identification results using PeptideShaker.

    ProGenNo/PeptideShaker_tutorial’s past year of commit activity
    0 0 0 0 Updated Sep 19, 2024
  • FindingHaploSignatures Public

    Code related to the "Finding Haplotypic Signatures in Proteins" publication

    ProGenNo/FindingHaploSignatures’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Sep 27, 2023
  • VariantPeptideIdentification Public

    Code related to the "Retention time and fragmentation predictors increase confidence in identification of common variant peptides" publication

    ProGenNo/VariantPeptideIdentification’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Aug 4, 2023
  • py-pgatk-UiB-fork Public Forked from bigbio/py-pgatk

    Python tools for proteogenomics analysis toolkit

    ProGenNo/py-pgatk-UiB-fork’s past year of commit activity
    Python 0 Apache-2.0 11 0 0 Updated Jun 12, 2023

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