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PyNIPT-PlugIns

The collection of Pipeline PlugIns that developed to use in CAMRI at University of North Carolina.

Description

  • UNCCH_CAMRI:

    • legacy version of the pipeline
    • dependency on ANTs, AFNI, and CAMRI_CORE plugin
    • core fMRI preprocessing pipeline
    • task-based fMRI analysis pipeline
    • 2nd level statistics using 3dMVM or 3dttest++ of AFNI
  • CAMRI_CORE:

    • naive python pipeline
    • migrating to use pure python libraries to achive cross platform
    • dipy, SimpleITK for registration
    • nilearn for preprocessing
    • ECT, slfmri (personal library)