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1. MachineLearningLifeScience/poli MachineLearningLifeScience/poli Public

   A library of discrete objectives

   Python 14 1

2. MachineLearningLifeScience/protein_regression MachineLearningLifeScience/protein_regression Public

   The codebase to replicate the analysis of "A systematic analysis of regression models for protein engineering" (2024).

   Jupyter Notebook 2 1

3. MachineLearningLifeScience/poli-baselines MachineLearningLifeScience/poli-baselines Public

   A collection of objective functions and black box optimization algorithms related to proteins and small molecules

   Python 5 2

4. MachineLearningLifeScience/corel MachineLearningLifeScience/corel Public

   Python 2 1

5. samuelstanton/lambo samuelstanton/lambo Public

   Code to reproduce experiments in "Accelerating Bayesian Optimization for Protein Design with Denoising Autoencoders" (Stanton et al 2022)

   Jupyter Notebook 64 22