GitHub - SalahBioPhysics/mcce3.0

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Name		Name	Last commit message	Last commit date
Latest commit History 13 Commits
bin		bin
delphicpp_v68_Nov2015		delphicpp_v68_Nov2015
lib		lib
param01		param01
param02		param02
param04		param04
param04_test		param04_test
param06		param06
param08		param08
param10		param10
param12		param12
param20		param20
param40		param40
tools		tools
How_to_edit_mcce_source_code.docx		How_to_edit_mcce_source_code.docx
Makefile		Makefile
README		README
README_GA.txt		README_GA.txt
error.log		error.log
extra.tpl		extra.tpl
init.c		init.c
mcce		mcce
mcce.c		mcce.c
mcce.h		mcce.h
mcce_good		mcce_good
mcce_validBaup		mcce_validBaup
name.txt		name.txt
rsync.log		rsync.log
run.prm.default		run.prm.default
run.prm.full		run.prm.full
run.prm.qq		run.prm.qq
run.prm.quick		run.prm.quick
run.prm.test		run.prm.test
submit.sh		submit.sh

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Update log
------------------------------------------------------------------------
2015-2016
------------------------------------------------------------------------
+  11/01/2015,  In step3, new Delphi is added
+  12/01/2015,  In Yifan's monte carlo, now it takes energies.opp file as an input.
+  12/24/2015,  Added flag for Gaussian smoothing, 1 means run Gaussian,
    zero means run step function.  For more information visit.
    http://compbio.clemson.edu/downloadDir/delphi/delphi95_manual.pdf
+  12/29/2015,  Added two flags for the use of Gaussian smoothing, sigma and srfcut.
+  02/01/2016,  Added a flag to display two extra columns to the opp energy files.