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1. UM-Applied-Algorithms-Lab/AWRY_Index UM-Applied-Algorithms-Lab/AWRY_Index Public

   Generates a Burrows-Wheeler transform from the sufr suffix array library, and implements the count() function.

   Rust 1

2. TravisWheelerLab/AvxWindowFmIndex TravisWheelerLab/AvxWindowFmIndex Public

   A fast, AVX2 and ARM Neon accelerated FM index library

   C 31 5

3. TravisWheelerLab/nailforge TravisWheelerLab/nailforge Public

   a fast and sensitive nucleotide and protein sequence homology prefilter

   C++ 1

4. TravisWheelerLab/HAVAC TravisWheelerLab/HAVAC Public

   Hardware Accellerated Viterbi Additional Coprocessor (HAVAC) is an FPGA-accellerated implementation of the Single-segment Ungapped Viterbi algorithm for use in nucleotide sequence homology search

   C++ 4 1

5. pinecone-datalogger pinecone-datalogger Public

   ARM based data logger firmware and board design, running on the Atmel SAM D20 MCU

   C 1 1

6. TravisWheelerLab/P7HmmReader TravisWheelerLab/P7HmmReader Public

   A simple C file reader for P7 profile HMM files generated by HMMER3 and other tools

   C 1