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Teif Lab

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  1. ChromHL ChromHL Public

    Predicting microdomain formation in chromatin from the DNA sequence and protein concentrations

    MATLAB 2

  2. TFaffinity TFaffinity Public

    Code for aggregating transcription factor binding affinity profiles in regions defined by a bed file

    MATLAB 1

  3. cfDNAtools cfDNAtools Public

    cfDNAtools - scripts for cfDNA processing

    Perl 1

  4. MatrixProteinBinding MatrixProteinBinding Public

    Uses the transfer matrix method to compute protein binding at single base pair resolution including competition from nucleosomes and DNA methylation if provided

    MATLAB

Repositories

Showing 4 of 4 repositories
  • cfDNAtools Public

    cfDNAtools - scripts for cfDNA processing

    TeifLab/cfDNAtools’s past year of commit activity
    Perl 1 0 0 0 Updated Feb 11, 2023
  • ChromHL Public

    Predicting microdomain formation in chromatin from the DNA sequence and protein concentrations

    TeifLab/ChromHL’s past year of commit activity
    MATLAB 2 0 0 0 Updated Apr 7, 2022
  • MatrixProteinBinding Public

    Uses the transfer matrix method to compute protein binding at single base pair resolution including competition from nucleosomes and DNA methylation if provided

    TeifLab/MatrixProteinBinding’s past year of commit activity
    MATLAB 0 0 0 0 Updated Jul 12, 2019
  • TFaffinity Public

    Code for aggregating transcription factor binding affinity profiles in regions defined by a bed file

    TeifLab/TFaffinity’s past year of commit activity
    MATLAB 1 0 0 0 Updated Nov 26, 2018

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