Skip to content
No description, website, or topics provided.
Branch: master
Clone or download
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Permalink
Type Name Latest commit message Commit time
Failed to load latest commit information.
bin
config
java/config/isa_configurator
template
.gitignore
.yardopts
ChangeLog
Gemfile
LICENSE
README.md
Rakefile
SPARQL-Templates
VERSION
application.rb
config.ru
helper.rb
helper_isatab.rb
helper_unformatted.rb
tbaccount.rb
toxbank-investigation.gemspec
unicorn.rb
util.rb

README.md

ToxBank Investigation

Investigation service for ToxBank.

Installation:

Dependencies: ruby 2.0.x, git, zip, java, curl, wget

gem install toxbank-investigation
toxbank-investigation-install # service setup, configuration and webserver start

Development:

get the development branch:

git clone git@github.com:ToxBank/toxbank-investigation.git  
cd toxbank-investigation
git checkout development

edit Gemfile:
uncomment and edit if you want to use github versions of opentox gems

  gem 'opentox-server', :git => "git://github.com/opentox/opentox-server", :branch => "development"
  gem 'opentox-client', :git => "git://github.com/opentox/opentox-client", :branch => "development"

uncomment and edit if you want to use local installations of opentox gems

  gem 'opentox-server', :path => "~/opentox-server"
  gem "opentox-client", :path => "~/opentox-client"

install the service via bundler gem

bundle install
bin/toxbank-investigation-install
# Do you want to start the webserver? (y/n)
# Answer "n" 
unicorn -c unicorn.rb # starts server as defined in unicorn.rb
# unicorn -h: more options

see also https://github.com/opentox/opentox-server

see also https://github.com/opentox/opentox-client

Documentation

You can’t perform that action at this time.