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Introduction

The aim of this project is to implement many state-of-the-art algorithms dealing with simialrity join. We will have a paper to be published in the VLDB2014 conference, which is an experimental evaluation of these algorithms.

Similarity join and similarity metrics

Notice: You are welcomed to read section 1-3 in our publication (papers/publication-vldb2014.pdf) for detailed description of these terms. ###Similarity join Similarity join is slightly different from the traditioinal join operator in database. Given two records set R and S and an attribute a, traditional join is to find out all the pairs r, s where r is from R, s is from S and r.a = s.a. In similarity join, r.a = s.a will be replaced by r.a is similar to s.a. And similarity metrics are used to define what is similar.

###Similairty metrics Two kinds of metrics are often used:

  1. character based, such as edit distance. Usually defined on strings.

  2. token based, such as jaccard, cosine and dice. Usually defined on sets.

####Edit distance: The minimum number of edit operations required to transform one string to the other.(e.g. ED("hi", "hot") =2).

####Jaccard: Jac(R, S) = (R \cap S) / (R \cup S);

####Cosine: Cosine(R, S) = (R \cap S) / sqrt(|R||S|);

####Dice: Dice(R, S) = 2(R \cap S) / (|R| + |S|);

How to build

Prerequisite

  1. gcc >= 4.7(we used 4.8.2), since some C++11 features are used in our source codes.
  2. boost >= 1.5(we used 1.5.1), we use the functional/hash.hpp in boost.
  3. gnu make.

Build Procedure

Build this project is rather easy, just use the makefile in the root directory. Since there are many algorithms, we suggest to use multi-threads to speed up the make process(e.g. make -j8 to use 8 threads). There are some commonly used tasks in the makefile:

  1. make to build all the programs.
  2. make ed to build all the algorithms which can be used for the edit distance similarity metric.
  3. make token to build algorithms for token-based similairity metrics.

After the make command, you will find a bin directory and all the executables can be found in it. This directory will be recreated at the beginning of every make process automatically so please do not use it to save your personal stuff.

How to use

Notice: we will add more detailed descriptions soon.

  1. For the algorithms designed for edit distance, usually the usage is ./PATH_TO_EXECUTABLE filename threshold. If the algorithm requires more parameters such as q, it should be added in the last.
  2. For the algorithms designed for token-based metrics, usually the usage is ./executable metric filename threshold, where the metric is one of "jaccard", "cosine" or "dice".

TODOs

Notice that we only list some TODOs here. We may fix them in the future but they are in low priority.

  • Add more comments.
  • Add more algorithms.
  • Add more aspects.

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Implementation of many similarity join algorithms.

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