TROM: Transcriptome Overlap Measure

2020-02-19

Introduction

A new bioinformatic tool for comparing transcriptomes of two biological samples from the same or different species. The mapping is conducted based on the overlap of the associated genes of different samples. Please refer to our publication at Statistic in Biosciences for detailed description of our method.

Installation

You can install TROM from github with:

# install.packages("devtools")

### Install dependencies 
# if (!requireNamespace("BiocManager", quietly = TRUE))
#    install.packages("BiocManager")
# BiocManager::install(c("GO.db", "topGO"))

devtools::install_github("Vivianstats/TROM")